Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02325 ATGGAGATTCTCCACTCCGACGAAACCTCACCAGAACCTTCTATTCCAACCACAAACGATGATTCTACGGACCCTGACGAAGGTGCGAGTCTCGATGTATCGGGAAAGAATCTAGAGTTTCCGGTGCCAGAGAATCCCCAAGACGATGCTATTGAGAGTTTATATATGTATAAGAATGTTTACAGTTTGATTCCAAAGACTGTGGGTGGTTTGGTAAGATTGAAAACGCTGAAATTCTTTGGAAATGAGATTAATTTATTTGCGCCAGAGTTTGGGAACATGACGAGATTAGAGAGGTTGCAGATGAAGGTATCTTCACCTGGAATTGGTGGGCTGCCCTTGCATAAGTTACAGGGTTTGAAAGAACTTGAGCTTTCTAAAGGTCCTTCTAGACCTTCTGCTTTTCCTATTTTGACTGAGATTGCTGCTCTTAAGTGTTTGACAAAGCTTTGCATTTGTCACTTCTCTATAAGATACCTTCCTCCGGAAATTGGGTGCTTAACGAATCTGGAATATCTTGAtctttcattcaataaaatgaAGACGTTACCCTCAGAGATTAGTTCTTTGAAAGTATTGATAACCATGAAAGTTGCGAATAATAAGTTGGTGGAACTACCGCCAGCCATGACCTCACTATCAAGGTTGGAGAATTTGGACCTGTCAAATAATAGGTTGACTTCATTAGGGCCTCTTGAACTTAGCTCAATGCATAGACTTCAGAACTTAAATCTTCAGTACAACAAGCTATCCGACATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGAGATAGATGCAAAGACAACTATAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAATTTACAGGAAAATGAGGAAACATTTTCTCATGGAACTCAGAACACCTCATCAAGCATATTAACAAACTCCTCATCTAACAATAGAGGTTTTGCAGCCTGGAAGTCAGGTAGACGGTGGAAGCGACGGCACACTAAACAGCAGAAAACTCGTCTAGAGCAGAAAGCTCGTCAAGAGCGGTTGAATAACAGCAGAAAGTGGAAAGGTGTAGATCATGACCAGTTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAATCTGGATACGCTTGTTTCTGAAAATGACTTCGGATCTGTATCAGACAATGGGAGCCTGAATGACAACCATGAAAAAATATTCTCCAAAGAAGCAGTCCACAACAATTTAATTGATAATGTTGACAACGATAGTCTGGATgacaatcataaaaaaatattctccGAAGAAGCAGTGGACAGCAATTTAATTGATAATGTCAAGGATGATGAGGTAATCATTGAAAAGCAGTTTTCTCAAGAAGATTGCTGCACCGCGGAAGGTAAAGATGAAAGAGATGCATCCTCATTCTCCTTGGACAATGTGCGAAGTGAACAAGATGGAGCATCTTGTTCAGATTTTTCAAAGTGTAATTTTAAATCTAAGAGGCATTCAGATCGAGATCTTGATAATCCTAAACCCTGCAAGTCTAGAAAACCAATTGGTGATGGCTCATTATTGTCTTCCAAGTACAGTAAAATTTCATTTTGTGGTACTGAGGACCATCTATCAGACGGCTTTTATGATGCGGGACGTGATCGACCGTTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCATCTCGTGAAGTCATCCTGTTAGACAGAAAAAGGGATGAAGCATTGGATGCCATCATGCTATCTGCTCAGGCAATAGTCTCTAATTTGAAGCAGTTAAATGGTTTGAACAAACCTGGGAGCCAGGGTGAAGTTGATAACTTGCAGACAGCATCACTACTTGCACTCTTTGTATCTGATCATTTTGGCGGAAGTGATAGAGGTGCTATTATAGAAAGGACACGCAAATCTGTTTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGTTCGACTGGAAGTAGCACAAGTTTAAATGTTGCAAACGAACCAGCTTTGAACACCATAGAAGATATTGATCTTTCTAAGATCTCTGAAAAAAATCTtgattctataaaaaaaagacgAAAGTCAATCATTGTTCCACTTGGCTCTGTTCAGTATGGCGTATGTAGGCATAGGGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTGTACCTTGTGAGCTTATTAGGGGTTACATGGATTTTTCACCACATGCCTGGAATATCATTCTGGTAAAGAGGGGTGTTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATTAGAGAAGAGAAAGATCCAGAATTTTTCTGCAGGTACATACCTCTTGGACGAACCCAAATTCCTCTTTCAACTAGCAGTCTTCCTAGTCCTGATTATTCCTTTCCATCTCTCTCTAACTGTGATGAACTTGAGAAAAAAGCTTCAACTACATTAGTTCGGTGCAAATATGGATCAGTTGAGGCTGCAGTGAAGGTGCGTACTTTGGAACTACAAGGGAGTTCAgcagacaaaataaaaaaatttgaatataattCTTTGGGAGAAATTAGAATTCTTGGTGCTTTTAAACACCCCTGCATAGTGGAAATGTATGGACACCAAATATCATGCAAATGGACTATCTCAGCTGATGGCACTCCTGAGAATCGTGTGTTGAGATCTgcaatttttttggaatatgTGGAAGCGGGTTCCTTGAAAAACTATCTAGAGCAGTTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCCTTGTATATTGCCAAAGATGTGTCATGTGCTTTGTCGGAGCTGCACTCAAAGCACATAATTCATCGTGACATAAAAAGTGAAAACATTCTGTTTGATCGTGATAGGAAGAGAGATGACGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCGCTACGATCACCTTTACATGCATGCTGTATTGCTCAGGTGGGAACACCTCCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCTCCGGAGGTCATGCGGACTATGTATAAAAAGAACACTTATGGATTGGTAAGATCCTCCAACTTATCATCcatataa 3099 0.3937 MEILHSDETSPEPSIPTTNDDSTDPDEGASLDVSGKNLEFPVPENPQDDAIESLYMYKNVYSLIPKTVGGLVRLKTLKFFGNEINLFAPEFGNMTRLERLQMKVSSPGIGGLPLHKLQGLKELELSKGPSRPSAFPILTEIAALKCLTKLCICHFSIRYLPPEIGCLTNLEYLDLSFNKMKTLPSEISSLKVLITMKVANNKLVELPPAMTSLSRLENLDLSNNRLTSLGPLELSSMHRLQNLNLQYNKLSDIFQIPSWICCNMEGNDGDRCKDNYSSSSVEMDVYESNLQENEETFSHGTQNTSSSILTNSSSNNRGFAAWKSGRRWKRRHTKQQKTRLEQKARQERLNNSRKWKGVDHDQLLSKKIHRISEPENLDTLVSENDFGSVSDNGSLNDNHEKIFSKEAVHNNLIDNVDNDSLDDNHKKIFSEEAVDSNLIDNVKDDEVIIEKQFSQEDCCTAEGKDERDASSFSLDNVRSEQDGASCSDFSKCNFKSKRHSDRDLDNPKPCKSRKPIGDGSLLSSKYSKISFCGTEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRKRDEALDAIMLSAQAIVSNLKQLNGLNKPGSQGEVDNLQTASLLALFVSDHFGGSDRGAIIERTRKSVSGSNYNKPFVCTCSTGSSTSLNVANEPALNTIEDIDLSKISEKNLDSIKKRRKSIIVPLGSVQYGVCRHRALLFKYLCDHMEPPVPCELIRGYMDFSPHAWNIILVKRGVTWVRMLVDACRPHDIREEKDPEFFCRYIPLGRTQIPLSTSSLPSPDYSFPSLSNCDELEKKASTTLVRCKYGSVEAAVKVRTLELQGSSADKIKKFEYNSLGEIRILGAFKHPCIVEMYGHQISCKWTISADGTPENRVLRSAIFLEYVEAGSLKNYLEQLSEAGEKHVPVELALYIAKDVSCALSELHSKHIIHRDIKSENILFDRDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAQVGTPPPCVCVGTPRWMAPEVMRTMYKKNTYGLVRSSNLSSI 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02325 1032 Gene3D Transferase(Phosphotransferase) domain 1 813 1022 - -
Tsu02g02325 1032 PRINTS Leucine-rich repeat signature 213 226 - -
Tsu02g02325 1032 PRINTS Leucine-rich repeat signature 170 183 - -
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 10 24 - -
Tsu02g02325 1032 ProSiteProfiles Leucine-rich repeat profile. 215 236 IPR001611 GO:0005515
Tsu02g02325 1032 Pfam Protein kinase domain 843 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02325 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 944 956 IPR008271 GO:0004672|GO:0006468
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 496 516 - -
Tsu02g02325 1032 ProSiteProfiles Leucine-rich repeat profile. 239 260 IPR001611 GO:0005515
Tsu02g02325 1032 PANTHER BNAC08G43810D PROTEIN 51 1023 - -
Tsu02g02325 1032 SUPERFAMILY RNI-like 50 263 - -
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 324 338 - -
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 324 348 - -
Tsu02g02325 1032 Pfam Ethylene-responsive protein kinase Le-CTR1 676 759 - -
Tsu02g02325 1032 SMART serkin_6 807 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02325 1032 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 51 1023 - -
Tsu02g02325 1032 Pfam Leucine rich repeat 196 250 IPR001611 GO:0005515
Tsu02g02325 1032 Coils Coil 330 350 - -
Tsu02g02325 1032 ProSiteProfiles Protein kinase domain profile. 803 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02325 1032 ProSiteProfiles Leucine-rich repeat profile. 169 190 IPR001611 GO:0005515
Tsu02g02325 1032 SUPERFAMILY Protein kinase-like (PK-like) 817 1015 IPR011009 -
Tsu02g02325 1032 Gene3D Ribonuclease Inhibitor 27 280 IPR032675 -
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 496 512 - -
Tsu02g02325 1032 MobiDBLite consensus disorder prediction 1 44 - -
Tsu02g02325 1032 SMART LRR_typ_2 167 190 IPR003591 -
Tsu02g02325 1032 SMART LRR_typ_2 237 263 IPR003591 -
Tsu02g02325 1032 SMART LRR_typ_2 213 236 IPR003591 -
Tsu02g02325 1032 SMART LRR_typ_2 71 93 IPR003591 -
Tsu02g02325 1032 SMART LRR_sd22_2 213 234 - -
Tsu02g02325 1032 SMART LRR_sd22_2 167 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02325 Tsu-Chr2 23587449 23594553 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02325 809 1010 MAP Kinase Kinase Kinase AT4G31170 28.713 1.34e-15 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Tsu02g02325 Pkinase 4.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02325 - - mtr:MTR_4g068740 1755.73