Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02289 ATGGAGTATCTACCTGGTGGAGATATGATGACATTGCTGATGCGGAAAGATATACTGACTGAAGATGAAGCTAGGTTCTATGTCGGGGAGACTGTTCTAGCCATAGAGTCCATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGTTGGATAAACATGGTCACATGAAATTATCAGATTTTGGATTATGTAAGCCGCTGGACTGCAGTAACCTTCAGGAAAAAAGACTTATCTGTTG 254 0.3898 MEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKHGHMKLSDFGLCKPLDCSNLQEKRLIC 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02289 84 SUPERFAMILY Protein kinase-like (PK-like) 1 75 IPR011009 -
Tsu02g02289 84 Pfam Protein kinase domain 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02289 84 ProSiteProfiles Protein kinase domain profile. 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02289 84 Gene3D Transferase(Phosphotransferase) domain 1 8 76 - -
Tsu02g02289 84 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Tsu02g02289 84 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 1 77 - -
Tsu02g02289 84 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02289 Tsu-Chr2 23137958 23138604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02289 1 80 AGC Kinase Gene Family AT4G14350 96.250 3.67e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Tsu02g02289 Pkinase 3.7e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02289 K08790 - sly:101254034 167.933