Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02287 ATGACTTTTGGTTTGGTTTACACAGTTTATGCTACTGCAGTAGACCCAAACAATGGTAGCCTAGGAACAATTGCTCCAATTGCAATTGGTTTCATTGTAGGAGCCAACATCTTGGCAGGTGGGGACTTCGATGGGGCTTCCATGAGCCCAGCAGTGTCTTTTGGGCCTGCTGTTGTTAGCTGGACATGGGCTAATCAATGGGTCTATTGGGTCGGCCTGTTGGTTTGTTCTGCTATTGCTACAGTTGTCTAA 252 0.4683 MTFGLVYTVYATAVDPNNGSLGTIAPIAIGFIVGANILAGGDFDGASMSPAVSFGPAVVSWTWANQWVYWVGLLVCSAIATVV 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02287 83 Gene3D Glycerol uptake facilitator protein. 1 83 IPR023271 -
Tsu02g02287 83 SUPERFAMILY Aquaporin-like 1 81 IPR023271 -
Tsu02g02287 83 PRINTS Major intrinsic protein family signature 30 52 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02287 83 PRINTS Major intrinsic protein family signature 67 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02287 83 PANTHER MAJOR INTRINSIC PROTEIN-RELATED 1 83 - -
Tsu02g02287 83 Pfam Major intrinsic protein 1 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu02g02287 83 PANTHER AQUAPORIN-8 1 83 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02287 Tsu-Chr2 23094778 23095029 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02287 1 83 Major Intrinsic Protein MIP AT2G36830 80.723 1.76e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02287 K09873 - ncol:116254500 147.517