Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02284 ATGGTTCGCAAAGGCAACAACAACAatgaaatagaagaagaagaagaagaggaacaaGTGTTTCGACGTGTGAAGAGAGAACGACTCAATGCAAATGATATAGCTGCGGAGGAGCAGAACTCTTCTAGTGGCAGAATCAATATCCGTTCCGAGTTCCTCAAACTCAAGTCTCTCATCAATGAGAAAAAGGATGATTTGATGAAAATTGATTCAGACATGTTTTATTCAATCCTTAACGAGTTCAACAAGTTACATGACCAAGTCATGAGACCTCAAGAGCAAGTTGTTGACGCTGAAGCACTTCTCGATCTTACATGCACTTTGGTTGAATCTGTTAAGTCTGTGGTCAATGAAGGTGTTACTCCTTCTCAATTTGTTTCTTCTCTTCTCAAACACTATGCTCACCCACCCAATACTTCAATCGACTGGAAAAACCTCGGCATGGCGGTTTCCCCCATTTTCCTCACGGCTCATGGCTCTTCTACCATGCTTGGTCCAATGGAAAATCAGTTGAAACAACACAAAACGACCGTGTCTAGAAAACGAGCTCCTCTCCCAACTACAACTACTAAGCCTGAACAACTTGATGATGCTGTTGGAGGAGAAAAAACTGATACGGATAAAAACATGTTAACCATGTTTAACATattaagagaaaagaaaaaggttcaACTTGAACACCTGATTTTGAACAGATTTTCATTTGGTCAGACAGTGGAAAACTTGTTTGCCCTATCATTTTTAGTGAAAGATGGTCGTGCCGAGATTATTATGGACAAAAATCGTGTACATTATGTTTCACCAAAAAATGCTCCGACTGCTAACTCAGTAACGTCAAAAGAAGTTTCTTACACTCATTTTGTCTTTAGATATGATTTCAATGACTGGAAGATGATGAAGGATATTGTGGCTGAGGGTGAAGAGTTAATGCCACAAAGGATTCAATACAGCGATGTGGTTGACTCACGGGCAGAAATGAGTGGTGACAATTCCCAACTAGCATTGGCCGTGACTCCGATAAAAAAGATATCCAAGAACCGGGGGCAGGTTGTGCAGGAGGAAGTTGTGGTGTAG 1074 0.3929 MVRKGNNNNEIEEEEEEEQVFRRVKRERLNANDIAAEEQNSSSGRINIRSEFLKLKSLINEKKDDLMKIDSDMFYSILNEFNKLHDQVMRPQEQVVDAEALLDLTCTLVESVKSVVNEGVTPSQFVSSLLKHYAHPPNTSIDWKNLGMAVSPIFLTAHGSSTMLGPMENQLKQHKTTVSRKRAPLPTTTTKPEQLDDAVGGEKTDTDKNMLTMFNILREKKKVQLEHLILNRFSFGQTVENLFALSFLVKDGRAEIIMDKNRVHYVSPKNAPTANSVTSKEVSYTHFVFRYDFNDWKMMKDIVAEGEELMPQRIQYSDVVDSRAEMSGDNSQLALAVTPIKKISKNRGQVVQEEVVV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02284 357 PANTHER UNCHARACTERIZED 12 356 IPR027786 GO:0005634|GO:0006281|GO:0030915
Tsu02g02284 357 MobiDBLite consensus disorder prediction 177 202 - -
Tsu02g02284 357 Pfam Nse4 C-terminal 223 309 IPR014854 -
Tsu02g02284 357 MobiDBLite consensus disorder prediction 180 194 - -
Tsu02g02284 357 PANTHER NON-STRUCTURAL MAINTENANCE OF CHROMOSOMES ELEMENT 4 12 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02284 Tsu-Chr2 23045492 23046565 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02284 43 357 Non-SMC Element family AT1G51130 51.534 1.98e-108 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02284 K22825 - gmx:100792117 434.106