Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02249 ATGGCAGTAAGAGATGCTGTGATGGTTGAAGTCGGTAGCATAcctgatgaaaatggagaagaagaaagttcTGCTGAACCAACTGACAAACAAGACCAAGATGATAACGTGACTCAAGATTCTTCTGGAGGAGCGGTAACAATTTTCTCAGCAGTTCCCACACTACCGGACGCCTCTGCTGATGAGCCCTATGTGGGTCAGGAGTTCGAGTCGGAAGCAGCAGCACATGCCTTTTATAATGCATATGCAGCTGAGGTTGGATTCATCATACGCGTAAGCAAACTCTCACGATCAAGGCGTGACGGAACTGCTATTGGACGCGCTCTTGTTTGCAACAAAGAGGGTTACAGAATGCCTGATAAGCGCGAAAAGATCGTAAGACAAAGGGCTGAGACAAGGGTTGGTTGCAGGGCAATGATTATGATGAGGAAAATTAATTCTGGTAAATGGGTTATTACAAAGTTTGTAAAGGAACACACACATCCCTTGAATCCCGGAAGTAATAGAAGGGATTGCATGCTTGAACTATATCCGTCTCAGAACGAACATGATAAAATTCGCGAACTATCTCAGCAGTTGGCAATAGAGAAGAAGCGATCAGTGACTTATAAAAGACAACTTGAAGTGATATTTGAATATATCGAAGAGCATAATGTGACCCTTTCACACAAAATACAGCACATAGTAGACAGTGTGAAGCAGATGGAAcctaaagaagaagaagaagaaaatcattGA 738 0.4011 MAVRDAVMVEVGSIPDENGEEESSAEPTDKQDQDDNVTQDSSGGAVTIFSAVPTLPDASADEPYVGQEFESEAAAHAFYNAYAAEVGFIIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKREKIVRQRAETRVGCRAMIMMRKINSGKWVITKFVKEHTHPLNPGSNRRDCMLELYPSQNEHDKIRELSQQLAIEKKRSVTYKRQLEVIFEYIEEHNVTLSHKIQHIVDSVKQMEPKEEEEENH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02249 245 Pfam FAR1 DNA-binding domain 78 165 IPR004330 -
Tsu02g02249 245 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 10 241 - -
Tsu02g02249 245 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 241 - -
Tsu02g02249 245 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02249 Tsu-Chr2 22529128 22530572 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g02249 FAR1 1e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02249 - - gmx:100806900 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05303 02 61743848 61747276 Tsu02g02249 02 22529128 22530572 PCT