Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02244 ATGATTGGAGGGGATTTGAACTACTTGATGACAGAATTGACCCTCGAATCTAGAGATGTCAACGGGGTGGGAAATGTGCGGAAGAAGCTTCCCGTTCCCCGCCCTGAAATATCCCCGCGGAAATTTTTGCCTTCATCCCTGTTCCCACGGAGGAATATTTGTCCCCATCACCATCTCCACGGATCCCCAGTTTCATATGGTGAAAAAGGTTCAGTTTTTTGTGGTTTAAAATCAGATGGATCTCATACTGTAACTTGTTATGGATCTAACTCAGCCATAATCTACGAAACACCAACACATTTCTCATTTCTTGGTTTAACAGCTGGTGATGGATTTGTCTGTGGTCTTCTAATGGATTCAAATCAACCTTACTGTTGGGGTAATAGTGGCTACATTGAAATGGGTGTGCCTCAACCTATGATTAAAAAAGCTCAGTACTTAGAAATTAGTGCTGGTGATTACCATGTATGTGGATTAAGAAAACCATGGAAAGTAGAAAATGTTTCTTTAGTTGATTGTTGGGGTTATAACATGACAAAAAGTTACATGTTTGATGGAATGATTCAATCAATCTCAGCTGGTTCTGTGTTTAACTGTGGATTGTTTTCTAACAATAGAAGTGTTTTCTGTTGGGGTGATGAGACTAGTAGTAAGGTTATTAGTTTGACTCCTTTGAAAATGAAGTTCAAAATGATTTCTGCTGGTGGTTATCATGTTTGTGGAATCTTAGAAGGGGTAAATTCTAGAACTTTTTGTTGGGGGAGAAGCTTGGACATTGAGGAACAAATTTCAGTAACACATGTAGGTCAAGGTAATGTAGATTTGGCTCCAAATGATCCTATGATTTCTATAGTAGGAGGAAGGTTTCATGCTTGTGGCATAAAAAGTTATGATAACGGAGTTATTTGTTGGGGGTTTATGATCAAATCAAGCACTTTAGCTCCTAGTGAGATTAAGGTTTATGAGATTGCAGGTGGTGATTATTTTACTTGTGGAGTACTTGCTGGGAAAAAATCTCTTGTGCCTTTTTGTTGGGGTGTTGGTTTCCCTACTTCTCTTCCTTTAGCCGTCTTGCCGGGAATATGCAAGCCATTTCCATGTTCTCATGGTTTCTATGAATTTGATCAAAAGGGTCTTTGCAAGTTTCCAAATTCTGGTCTTTGCATGCCATGCAGTGGTGAATGTCCTATTGAAATGTATCAGAAAAGTGCATGCAATTTGGCTTCTGATAGAGTGTGTGAATATAACTGTTCTGCTTGTTCTTCACATGAATGTTTCTTACACTGCTCCTCTTCATATTCTAATGTTGGCaatgagaagaaaaatgagaaaatttggGCTTTGCAGTTACCAGTGCTTATTGCAGAGATTGGTTTTGTACTTTTTATAGTTAGTATTGCATCATTAACTTCGGTTTTGTATGTTCGCCACAGGCTAAGAGATTGCGAGTGTTCAGCAAGATTAAAAAATGCGAAGAAACTTAATCGAAGTTCTTCCCTTCATCAAAATGAGAACCGCAAAATCCGTCCGGAAATGGAGGAGCTCAAGCTTAGGAAGGCTCAAAGATTCACCTATGAAGAACTTGAAACTGCAACAAGTGGATTCAAAGAAGAATCAATAGTAGGAAAAGGAAGTTTTTCTTGTGTATTCAAAGGAGTTTTAAAAGATGGAACAGTAGTAGCTGTTAAAAGGGCTATAGTATCTCTTTCTCCTCCCAACAACATGCACAAGAATAACAAAGAATTTCACACTGAACTTGACTTACTCTCAAGATTAAATCATGCTCATTTGCTCAATCTTCTAGGCTATTGTGAAGAAGGTGGAGAAAGACTTCTTGTTTATGAGTTCATGGCTCATGGATCTTTGTATCAACACCTTCATGGACCAAACCAAGTGTTGAAACAGGAATTAAACTGGATAAGAAGGGTAACAATAGCAGTTCAAGCGGCTCGCGGGATCGAATATTTGCACGGCTACGCTTGTCCACCGGTGATACATAGAGACATTAAGTCCTCAAACATACTCATTGATGAAGAACACAATGCAAGAGTTTCTGATTTTGGTTTATCATTGTTAGGTCCTTTAGATAGTAATTCTCCACTTGCCGAACTACCGGCCGGAACTCTCGGTTACCTTGATCCTGAATACTATAGACTCCATTACCTCACAACAAAATCTGATGTCTATAGTTTTGGTGTTCTACTCTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGATGCAATATGAAGAAGGAAATAACATAGTTGAATGGGCAGTACCTTTGATCAAATCAGGTGATATAGCTGCAATATTGGATCCAATTCTTAAACCTCCTCGCGAAATCGAAGCGTTGAAAAAGATAGCTAATGTAGCTTGTAAATGTGTGAGAATGAGAGGAAAAGAAAGACCTTCAATGGACAAAGTAACAACTTCTTTGGAAAGATCTCTTGCTGTGTTAATGGGAAGTCCATGCATTGATCAACCAATTTTACCTTCTGAGGTTGTTTTAGGAAGTAATAGAATGCATAGAAAATCATCTCAAATGTCTTCAAATAGATCAGTTTCTGAAACTGAAGATCAAAGATTTGAGCTTAGAGCACCTTCATGGATAACATTTCCAAGTGTTGCATCTTCTCTAAGAAGAAAATCATCAATGTCAGAAGCAGATGTTGATGGAAAAATTGCAGAAATGAAGATTAATATTGGGAATGTTGGAGGGAGTAGTGATATGTTGAGAAGTTTAGAGGAAGAAATTGGACCTGCTTCTCCACAAGAGAGGTTGTTTTTGGAACACAACTTCTAA 2808 0.38 MIGGDLNYLMTELTLESRDVNGVGNVRKKLPVPRPEISPRKFLPSSLFPRRNICPHHHLHGSPVSYGEKGSVFCGLKSDGSHTVTCYGSNSAIIYETPTHFSFLGLTAGDGFVCGLLMDSNQPYCWGNSGYIEMGVPQPMIKKAQYLEISAGDYHVCGLRKPWKVENVSLVDCWGYNMTKSYMFDGMIQSISAGSVFNCGLFSNNRSVFCWGDETSSKVISLTPLKMKFKMISAGGYHVCGILEGVNSRTFCWGRSLDIEEQISVTHVGQGNVDLAPNDPMISIVGGRFHACGIKSYDNGVICWGFMIKSSTLAPSEIKVYEIAGGDYFTCGVLAGKKSLVPFCWGVGFPTSLPLAVLPGICKPFPCSHGFYEFDQKGLCKFPNSGLCMPCSGECPIEMYQKSACNLASDRVCEYNCSACSSHECFLHCSSSYSNVGNEKKNEKIWALQLPVLIAEIGFVLFIVSIASLTSVLYVRHRLRDCECSARLKNAKKLNRSSSLHQNENRKIRPEMEELKLRKAQRFTYEELETATSGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSLSPPNNMHKNNKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLYQHLHGPNQVLKQELNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPLDSNSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMMQYEEGNNIVEWAVPLIKSGDIAAILDPILKPPREIEALKKIANVACKCVRMRGKERPSMDKVTTSLERSLAVLMGSPCIDQPILPSEVVLGSNRMHRKSSQMSSNRSVSETEDQRFELRAPSWITFPSVASSLRRKSSMSEADVDGKIAEMKINIGNVGGSSDMLRSLEEEIGPASPQERLFLEHNF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02244 935 PANTHER RECEPTOR-LIKE KINASE 53 935 - -
Tsu02g02244 935 ProSitePatterns Protein kinases ATP-binding region signature. 541 563 IPR017441 GO:0005524
Tsu02g02244 935 Gene3D - 106 443 IPR009091 -
Tsu02g02244 935 Gene3D Phosphorylase Kinase; domain 1 505 616 - -
Tsu02g02244 935 SUPERFAMILY RCC1/BLIP-II 70 306 IPR009091 -
Tsu02g02244 935 SMART serkin_6 535 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02244 935 SUPERFAMILY Protein kinase-like (PK-like) 514 814 IPR011009 -
Tsu02g02244 935 Pfam Protein tyrosine and serine/threonine kinase 538 813 IPR001245 GO:0004672|GO:0006468
Tsu02g02244 935 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 53 935 - -
Tsu02g02244 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 664 676 IPR008271 GO:0004672|GO:0006468
Tsu02g02244 935 ProSiteProfiles Protein kinase domain profile. 535 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02244 935 Gene3D Transferase(Phosphotransferase) domain 1 617 821 - -
Tsu02g02244 935 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 366 413 IPR001368 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02244 Tsu-Chr2 22506332 22510500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02244 64 935 Receptor kinase-like Gene Family AT3G59420 66.213 0.0 1154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Tsu02g02244 PK_Tyr_Ser-Thr 7.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02244 - - gmx:100797455 1436.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02244 02 22506332 22510500 Tsu02g05302 02 61738236 61741777 PCT