Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02243 ATGGGGCATAAGAAGAAGCgtggaggaggaagaagaaacaaagcAAGAACACCTTCCAAAGACCACACTTCTCCATTCAGTCACGATGATCATAACGAACAACTCTCCGAAGAGATTACTGCACTatgtgCCATTTTTCAAGAAGATTGTGAATTTGTTCCTGGTTCGCCTCCTCAAGTAGTTATTAAGCtaagGCCTTACTCGAATGACATGGGTTATGAGGATGTAGATGTTTCAGCTGTTCTTGTTGTTAGGTGCTTACCTGGGTATCCCTTCAAGTGTCCCAAGTTGCAGATTACTCCTGAGATGGGTTTATCAGAAACTGATGCTAATAAACTTTTGTCTCTCCTCCTTGATCAGGCTAGTTTAAACGCTAGGGAGGGACGAGTAATGATCTTCAATTTAGTTGAGGCTGCTCAAGAATTTCTGTCTAGAATTGAGCCTATTGCTAAACCAACTGAATCTAAGTTTTTGCACTCAACTACAGAAGGCATTGAAGAATTATGTCTCAAGGATATGACATCTTCAAATAAGAATAGATCTTTTGTTTATGGTTTCATCGACCTTTTCGGTGGCTATGGGGAGTCCTGGAATTGGAGTTTTGGAATTGATGAAACTTCTGTAAAAGGTTCTTCTCTTCCTTCCTCTAAGTTAGATGCCTCCAAGCCACGAATAGAAGCCCGGGAAAAGAAATCTGATAGCAAGGAAAACCCGTCCATATTGCAAGAACTTCCTGCCAAATTAGATACTGTTGGAGAAGTTAGTGAAGACAGTAACAATTGCTTATCTTTGACTCGTTCAAGTAGTTCAAGTAGTTCTCTGATGGATGATTTTGTAGGGGACGACAATGAAGGTGAGAAAGAGTATTTTATTGTTGACGAGTATACAACAGAAGATAACGACGAGTATACAACAGAAGATAACAAAGGCATGTCTGGAAGTGAGTCTACAGAGTCTCTTTCTTCTGCATCCTCGCCTCATCAACAAGAAGCATCTCAAACAATAGAGAAGGAtctaataatgGTTCACATGCTCCGCCTTGCTTGTGCCACTAAAGGTACCTTGGCCGACTCTTTGCCGCAATTAGCAACAGAGCTGTACAATTTAGGGATCTTTTCTGACTCGGCACGTGATATGGCATCAAAACCGCCTTCCGTTTTCAACAAAACTTTTGATCATATCTTCAAGAAACACCTGGCATCATCCAGAATATCTCAATTTTGGACACCCTCTGATCTTGGAGACTCTAATACAGTTCACCATAGTTCTCgatatttaaatgattttgagGAGCTACGACCTCTTGGTCATGGTGGTTTTGGTCACGTTGTGTTGTGCAAAAATAAACTCGATGGAAGGCAGTATGCAATgaagaaaattcaccttaaggACAAAAGCATGCCTGACCGAATATTAAGGGAGGTTGCTACGCTTTCTCGTTTACAACATCAACATGTTGTTCGGTATTATCAGGCATGGTTTGAAACTGGAGTTACAGATTCTTATGGTGATCCTGCTGGGGATTCAAGGACTCCAGCGAGCTCTACTTTCAGCTACAATGTTGCAAGCTCTAATGATGCTGTTGGGCGTGAGAATCAACTTGAATCAACATATCTTTATATACAAATGGAGTACTGTCCCAGGACTCTTCGCCAGATGTTTGAATCATATAATCATTTTGACAAAGAACTGGCATGGCATTTGTTTCGCCAAATAGTAGAAGGCTTGGCACACATACATGGGCAAGGAATAATTCATCGGGACTTAACACCAAGTAACATATTCTTTGATGCTCGCAATGATATTAAAATCGGTGACTTTGGTCTTGcCAAGTTCTTGAAGTTGGAGCAGTTGGATCAAGATCTAGCACATCCTACTGATACAACTGGAGTTTCCATTGATGGCACTGGACAAGTTGGGACATATTTTTATACAGCTCCTGAAATTGAGCAAGGGTGGCCTAAGATTGATGAAAAGGCTGACATGTACAGCTTAGGTGTGGTTTTCTTTGAGCTTTGGCATCCATTTGGAACAGCAATGGAGAGACACGTTGTTTTATCCGATCTGAAACAAAAAGGGGAACTTCCACCTGCTTGGGTTGCTGAGTTTCCAGAACAGGAATCCTTGTTGCGGCAGTTGATGTCTCTAGGTCCCTCAGATCGCCCATCTGCCACAGAACTTCTACATAATGCATTTCCTCCACGAATGGAGTCTGAATTGTTAGACGATATCCTGCGAACAATGCAGAAATCAGAGGATACAAGCATTTATGATAAAGTTTTAAATGCTATTTTTGATGAAGAGATGTTAAGCACAAAACACATTCATCAGGTTGGTAGATTGGGGTCAGTTGGAGATAACGGTTCATCAATTCAGCACACAGATTTTGTAACTGAAGTCCGAGATTATGTTGTAGATGTCATCAAGGAAATTTTCAAGCAGCATTGTGCTAAACACCTAGAAATATCACCAGTGCGATTATTGGATGATTGTCCACAGTTTAATAGAAATGCAGTTAAACTTTTGACTCAAGGAGGAAACATGCTTGAACTTTCCCATGAGCTGCGTTTGCCTTTTGTGAACTGGATTATATCTAACCAGAAATCTTCATTCAAACGATATGAGATATCATATGTTTACAGAAGAGCAGTTGGGCATTCATCACCAAACCGCTACCTTCAGGGAGATTTTGACATAATTGGTGGTACTTCAGCATTGACAGAGGCAGAGGTCATAAAGGTCACAAAGGACATAGTCACTTGTTTTTTCCATGAAGACTCGTGTGACATTCATCTAAACCATGCTGACCTTCTGGGTGCAATTTGGTCATGGACTGGAATCAAGGTAGAACACAGAGTTAAAGTAGCAGAGcTTCTTTCAATGATGGGTTCTTTGCGTCCTCAGTCCTCAGAAAGGAAATCAAAATGGGTAGTGATAAGACGGCAGCTTTTGCAGgAACTGGGTTTAGATGAAGCTATGGTAAATAGGTTGCAGACTGTAGGTCTGAGATTCTGTGGATCTGCAGATCAGGCACTTCCCAGACTAAGAGGAGCTCTACCATCTGATAAGCGTACCTTCAAGGCACTTGATGAATTGTCTGAGCTTGCCAATCTCTTGAGAATTTGGAGGATTGacaaaaatgtatatatagATGCATTAATGGCACCAAACGAAAGTTATCATAGAGATTTGTTTTTTCAGGTATACTTAAGGAAGGAAAACAGTTCTTCATCACTCTCTGAAGGTATCTTGTTAGCTGTTGGTGGCCGATATGACAATTTGCTTCATCAGTTGAGGAGTAGCGACTATAAAGGAAATCCTCCCACTGGTATGGGGACTAGCCTTGCACTAGAGACAATAATTCAGAATTGTCCTGTAGATTTTAAACCTAGTCGAAATGAAGCCAACATCAGTATTCTTGTGTGCTCAAGAGGAGGAGGTGGTCTGTTGGTGGAGCGCATGGAACTAGTTGCTGAATTGTGGCAGGAGAACTTTAAGGCCGAATTTGTTCCCATCCCTGATCCAAGTCTTACAGAGCAGTATGAGTACGCCAATGAACATGATATCAAATGTCTCGTTATTATTACAGATGCAAGTTTCTCCCTTGCAGATACGGTAAAGGTTCGACATCTTGAACTTAAGAAGGAGAAAAATGTTGAGAGAGAGAACCTCGTCAAGTTTCTATCGGATGCTATGGCAACACAATTTAGAAATCCCTATATATGGATTTGA 3732 0.4011 MGHKKKRGGGRRNKARTPSKDHTSPFSHDDHNEQLSEEITALCAIFQEDCEFVPGSPPQVVIKLRPYSNDMGYEDVDVSAVLVVRCLPGYPFKCPKLQITPEMGLSETDANKLLSLLLDQASLNAREGRVMIFNLVEAAQEFLSRIEPIAKPTESKFLHSTTEGIEELCLKDMTSSNKNRSFVYGFIDLFGGYGESWNWSFGIDETSVKGSSLPSSKLDASKPRIEAREKKSDSKENPSILQELPAKLDTVGEVSEDSNNCLSLTRSSSSSSSLMDDFVGDDNEGEKEYFIVDEYTTEDNDEYTTEDNKGMSGSESTESLSSASSPHQQEASQTIEKDLIMVHMLRLACATKGTLADSLPQLATELYNLGIFSDSARDMASKPPSVFNKTFDHIFKKHLASSRISQFWTPSDLGDSNTVHHSSRYLNDFEELRPLGHGGFGHVVLCKNKLDGRQYAMKKIHLKDKSMPDRILREVATLSRLQHQHVVRYYQAWFETGVTDSYGDPAGDSRTPASSTFSYNVASSNDAVGRENQLESTYLYIQMEYCPRTLRQMFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLAHPTDTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFGTAMERHVVLSDLKQKGELPPAWVAEFPEQESLLRQLMSLGPSDRPSATELLHNAFPPRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKHIHQVGRLGSVGDNGSSIQHTDFVTEVRDYVVDVIKEIFKQHCAKHLEISPVRLLDDCPQFNRNAVKLLTQGGNMLELSHELRLPFVNWIISNQKSSFKRYEISYVYRRAVGHSSPNRYLQGDFDIIGGTSALTEAEVIKVTKDIVTCFFHEDSCDIHLNHADLLGAIWSWTGIKVEHRVKVAELLSMMGSLRPQSSERKSKWVVIRRQLLQELGLDEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRTFKALDELSELANLLRIWRIDKNVYIDALMAPNESYHRDLFFQVYLRKENSSSSLSEGILLAVGGRYDNLLHQLRSSDYKGNPPTGMGTSLALETIIQNCPVDFKPSRNEANISILVCSRGGGGLLVERMELVAELWQENFKAEFVPIPDPSLTEQYEYANEHDIKCLVIITDASFSLADTVKVRHLELKKEKNVERENLVKFLSDAMATQFRNPYIWI 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02243 1243 SUPERFAMILY Class II aaRS and biotin synthetases 798 1121 IPR045864 -
Tsu02g02243 1243 Pfam RWD domain 33 143 IPR006575 GO:0005515
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 14 32 - -
Tsu02g02243 1243 Pfam Anticodon binding domain of tRNAs 1138 1235 IPR024435 -
Tsu02g02243 1243 SUPERFAMILY Protein kinase-like (PK-like) 425 739 IPR011009 -
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 309 332 - -
Tsu02g02243 1243 ProSitePatterns Protein kinases ATP-binding region signature. 435 458 IPR017441 GO:0005524
Tsu02g02243 1243 SMART RWD2001b 37 146 IPR006575 GO:0005515
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 1 32 - -
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 295 332 - -
Tsu02g02243 1243 SUPERFAMILY Class II aaRS ABD-related 1136 1233 - -
Tsu02g02243 1243 Pfam Protein kinase domain 429 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02243 1243 PANTHER EIF-2-ALPHA KINASE GCN2 29 1243 - -
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 207 240 - -
Tsu02g02243 1243 Gene3D - 1134 1233 IPR036621 -
Tsu02g02243 1243 ProSiteProfiles Protein kinase domain profile. 429 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02243 1243 PANTHER HISTIDYL-TRNA SYNTHETASE 29 1243 - -
Tsu02g02243 1243 Gene3D Ubiquitin Conjugating Enzyme 24 152 IPR016135 -
Tsu02g02243 1243 Gene3D Phosphorylase Kinase; domain 1 416 545 - -
Tsu02g02243 1243 CDD STKc_EIF2AK4_GCN2_rpt2 422 729 - -
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 259 277 - -
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 259 282 - -
Tsu02g02243 1243 Pfam Histidyl-tRNA synthetase 881 1120 IPR041715 -
Tsu02g02243 1243 SUPERFAMILY UBC-like 30 143 IPR016135 -
Tsu02g02243 1243 ProSiteProfiles RWD domain profile. 37 146 IPR006575 GO:0005515
Tsu02g02243 1243 MobiDBLite consensus disorder prediction 221 237 - -
Tsu02g02243 1243 Gene3D Transferase(Phosphotransferase) domain 1 548 739 - -
Tsu02g02243 1243 ProSitePatterns Tyrosine protein kinases specific active-site signature. 584 596 IPR008266 GO:0004672|GO:0006468
Tsu02g02243 1243 Gene3D Bira Bifunctional Protein; Domain 2 794 1126 IPR045864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02243 Tsu-Chr2 22486707 22503989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02243 418 732 MAP Kinase Kinase Kinase AT1G63700 26.154 9.05e-23 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Tsu02g02243 Pkinase 4.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02243 K16196 - gmx:100797996 2024.98