Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02205 atgaatacAGAAAGATCAATAGAAGACCAATTCTCCAAGCTACATCCTTCTTTGCCAGAAAACACTAGAATCGGGATAATTGGTGCTGGTCCTAGTGGCTTATCAGCAGCGTATGCATTAACCAGACTTGGCTATAAGAATGTTACAGTTTTGGAGAAACATCACACAGTTGGTGGCATGTGTGAATCCGTAGAAATTGAAGGAAAAGTTTATGATTTAGGAGGACAAGTTCTAGCTGCAAGCAGTGCTCCGGTTATCTTTCACTTGGCGAAAGAGACAGGCTCTGAATTAGAAGAAATGGATTCCCATAAGCTTGCTGTTGTTGACCCTTCATCTGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGCAAATACAAGAAAAAGTGAAGAATTGTGGTCGTCTCGGTATCCATGCTGTTAGCGACATTGCTTCAGACTTAACTCCAGAGTATCTACAATGTCATGGACTCAAATCCATTCCTAAATCTGTAGCTTATGGTTACACTGCTTCAGGATATGGATTTATTCAAGACATGCCTTATGCCTACCTTCATGAATTTACTAGAACATCAATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACAAGTCTTTGGCAGAAGATTGCTGAATCACTTCCTTTGAGACTTCTATGTAACACTGAAGTATTGGCAATCAAACGGAACTCTGATAGTGTCAATGTTGATATCAAGAGATTAAACGTAGTTGAAACATTGGAATTTGATAAGATCATAATTTCTGGTTCGTTTCCATTAAAATACGGAAGAATTTACCAATCGCCTTCTACTTGCATAGAAAGCGAAAAAGGAGTAATGGATGCAAGTGATCTTGAAAAGGATTTATTCAGCAAAGTCGAAACAAATGACTACTACACTACTGTTTTAAAGATCAAAGGGCTTGAACATTTTCCTATtggattttattattttaataaatatatggaAGATCCCAGCACAATTGGAAATCCAGTTGCAATGCAGAAATTTTATGCTGACAGTAACATATTCTTGTTCTGGTCCTATGGCAACTCTGTTGATATCAAGGGACCAACTGTCAAGGAGCTTGCAATGAAGACAATAGAAGCCATGGGAGGAGAAGTTGAGAGTTTCATTCTTCTGCGTTGTTTTAAGTATTTTCCTCATGTTAGCAGCCAAgACATGAAAGATGGATTCTATGAAAAGTTGGAATCAGAACTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCATTTGAGCTTACAGAGAGGAACTCATCTTATGCAATGGCTCTAGTTTGCAAGAACTTTGCTAATAGCAATGAATTGCCAACATTTCCTTACACTAAGAATTTGTTTCCCTTGCAAACTGAGAGCCAAAAGAAGAACCCTAAAGAATTAGGTGAATTGCCGGAAGTGCAGTTTCCTAATTTGCCTACTTTGAATAGCTACTTAAATTACTGGGGGACTCATCCAATCACTCAAAATAGGACTCTTTACACGTGGATTAATGAAGAAGGGAATCCGGTGTGCCGCAGGACTTTCAGAGAACaacatttttattcttcttGTATTGCTCATAAGCTCTTGACAAGCCAAAAGCCGGTTATCAAGCCTGGTGATAGAGTTCTCCTGGTATATGTCCCCGGTTTAGACTTTATCGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCTTACCCGTTCCAATTATTCCCCCGGATCCGATGCAAAGAGGTGGACAAGCActgatgaaaattgaaaacattgCCAAGTCATGCGGCATTGTTGCAATTTTGTCAACTATATCTTATCACTCAGCTGTCCGTGcaggttcattgaaaaatttaatttcactAACACGAAAAAATGGGAAGTCATCCGCTCGGTGGCCCAATCTTCCATGGTTACACACTGATACCTGGGTCAAGAATTCCAAGAACATTGTTTTGGAGGATCTTGATGATCAATGTGAACCGCAACCTGGTGATACATGTTTCTTGCAATTTACATCAGGATCAACTGGTGATGCTAAAGGTGTCATGATCTCTCATGGTGGACTAATTCACAATGTGAAATTGATGCAAAGAAGATACAAAAGTACCTCAAGAACTAAACTAGTAAGTTGGCTTCCACAGTATCATGACATGGGGCTGATTGGGGGACTTTTCACATCGCTTGTTAGCGGTGGAAcagcaattttattttcaccaaTGACGTTCATCAAGAAACCACTCTTATGGCTTGAAATCATCAGCAAGTATCAAGCAACTCATAGTGCTGGTCCTAACTTCGCCTTCGAGTTACTGATTCGAAGATTGGAGGCCGACAAGGATAAGGTTCAGAATTTAGACCTTTCGTCCTTGGTTTTTCTAATGGTTGCTGCTGAACCAGTGAGACAGAAGACACTGAAAAGATTCATTGAGCTAACCACTCCTCTCGGTTTATCTCAAAAGGTGATGGCTCCAGGATACGGATTGGCAGAAAATTGTGTGTTTGTCAGCTGTGCATTTGGAGAAGGTGGGCCTCTCATTGTTGATTGGCAGGGAAGAGTTTGTTGCGGGTATGTTCGTCCAGAGGATACAGATATTGACATTAGAATAGTTGATCCAGACACTTGCGAAGAGCTTCACGTAGACGGAAAGGAGGGAGAAATCTGGATTAGTAGTCCAAGTGCAGGAGTAGGATACTGGGGAAGGGAAGAATTGAGTCAGAAAACATTCATGAATCAACTTGCTAATCGTCCTGGAAGTAACTACACGAGAACCGGAGACTTGGGACGAATAATAGATCAGAAGCTATTTATCACTGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAACATATACTCTTCTGATGTGGAAAAGACAATTGAGACTTCATCTGAATTTCTTCGTCCCGGATGCTGTGCTGTCATTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGGATTTCCATTCCTGAAGGTTCTGATCACGTCGCCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAGATCAGTTAGCAAAGATGTGATTGAGAAAATTAAGGTGCGTGTGGCAGAAGAACATGGCGTCAGCCTTGCTTCTGTCAAGTTGATCAAGCCTAGAACCATCAGCAAAACAACATCAGGAAAAATCAAGAGATTTGAATGTATCAAACAATTTACAGATGAGACCCTTAACTTGGTACCTTTAGGTACAAAACCTATGTTGACAAAGAAATCATTGGTATGGTCATTTACTACTACGGCAACATGCAGAGAAGAAAAACCAGTCCGACTCAAACTAGTAAGATGTTCACCTGTACCTAGTAAAAGGATCAATAAAAGCGACATTGTAGAGTTTTTGAAAGTGCTTATTTCTGAGCAGACTGGAGTACCAATCAACAACGTCTCAGTCACCGACAACCTGACATCCTATGGAATTGACTCAATTGGGGTGGTTAAAGCAACTCAAAAACTCTCAGATTTTCTAGGCACACCAGTTGCAGCAATAGATGTTTTCACTGCATCATGCATTCTAGAATTGGCTACCTTCTCTGAGGATCTTCTGTCAAAGACTCGGCCTCAGATAGTGAGAAGTGTACCGATACCTACTAAAAGAGTCAGTAAAAGTGACATTGTAGAGTTCTTGAAAGTGCTTATTTCTGAACAGACTGGAGTCGCAATCAACAAGATTTCAGTCACAGACAACCTGACATCCTATGGAATCGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTTGGAACACCAGTTGCAGCTATCGATGTTTTCACTGCATCCTGCATTACAGAATTGGCTAACTTCTCTGAGGATCTTCTGTCAAAGACTCAGCCTCAGCTTCCAAGCAATCCGACCGATGTTCCAGAGGCGGATATTGATTGTACTGAATCGGCTGTGGAGGTATCAAAGTCTCACCAATGGGGTATCCGCTTACTTCAATTCTTGGCTCTTATTTATATCTCTATCATGCTTGCCTGGCCTGCTTATTTATCCATCACTGCTTTCTTAAATTCCAGCATGTGTGTGAGTAAATCAGTAGCTGGAGTTCCCTGGTTAAATTATATAATGTCGCTGATTTTTGCTCCTCTTGCTTGGATTCTTTGCATTACTTCTACTTGTGTTTGCATTTCATTGTTCGGAAGTTCTTTACTGGGGCCAAACTGTGAACTTGCCTCTGACATCTCCATCTATTCAATGGATTTTGTCAAGTGGTGGGCACTATATAAGGCTCAAGAAATTTCCTCTAAAGTTTTGGCAGCACACCTCAGAGGAACAGTGTTTCTGAAATACTGGTTTGAGATGTTTGGTGCAAGAATTGGATCCTCAGTTCTACTTGATACGGTTGACATCACAGACCCAGCTCTGGTATCAATAGGTGATGAAGTTGTCATTTCGGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTCTAAGTCTCCATCCCATTAAGATTGGAAAATGTTCTTCTATTGGACCTTATGCTGTTGTTCAAAAAGGAAGTGTTATTGGTGAAAGTGCTGAAGTACAGGCCTTGCAAAAGGTTGGAAGAGGCGAGCATGTGCTAAAGCCGGATAAggttaataatattgataagAATGCAGATCTTCCAATTATTAACAGCAAAACTCAATATGATGCCATCTACCACTTTATTGGTATCTATCTTGTTGGTTTTCTCAGCTCCCTTGCTGCAGCCATTGCATacttcttatatataaaactcTCCAAGCAACCTCCATCACTTCAACACTTTTCATTTGTTTGCATATGTGGAGCTTTTCACTGGATCCCGTTCACCGCCATTGCATATGCTACAATGTTTTCTGATGTCCCATCAAATCCTATCACCTTTGCAATGACATTTACCAGTGCCTACTTACTTCATGGTCTCATACTCATCACTCTCACCGCTGTTTTTACTCGTCTCCTCATAtgtaatcaaaacaaaaccGAATTCAAAACCTGGCTTCTACGTCAAATGAACATTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATACTTACGTCTTTTGGGCGCAAAAATTGGCAAACATTGTTCCATTAGAGCCATCAACCCAGTTTCAAATCCAGAGTTAATGTCAATCGGTGCCGGTGTCCATCTCGGAGACTTTAGCAAAATAATTACAGGGTTTCATTCTTCCAACGGATATGCTAGCGGAAAAATCGAAGTTCAAGACAACTCAGTCATCGGAAGTCAAAGCCTAATTCTCCCCGGTTCTCTCATCCAAAAGAATGTGATCCTTGGTGCACTTTCATTAGCTCCAATGAACTCTATACTCCAAGAGGGTGGTTTATACATAGGATCACAATCCCATGTAAGTAATTTAACTGCACCATTACACAAACAAGACTCACAAAAAGTAACCTTGACATTAACAAGAACATGGTATCAAACCTTCACATCACTCTTCATTCAGCCATTTCTACAAACAGCTTTACCGCATATCTTACTAGCTTTATCAATTTATCCTCCTTTGAACCTAATTTTCCACCTCAAGAATACTAAAAAAGTTCCAATCTTTTGGCTACTTCCATTGTTTTGGATTCTCTCAGGAATTTTAGCTGCATTAACATGTGTTATAGCCAAATGGGTCCTTattggaagaaagaaaaaaggtgAAAAAATTCCTATATGGAGTAAAAGTATAATCTTTGACAGTACATGGCAAGCAATAAGAACATTAATTGGTGATTATTTCATGGAAATGACATGTGGGTCATTTATGTTTGTAATATGGATGAAAATGATGGGTGTTGATGTAAACATAGGTGATGATGATGTTTATGTTGATAGCATGGGAACATTGTTGAATCCTGAGATggtgaaaattgaaaaaggtGGTTGTGTTGGAAAAGAAGCATTGTTGTTTGGACATATATATGAAGGTGATGAAGGTGGAATGGTCAAGTTTGGAGAGATTAAGATTGGTGAAAATGGTTTTGTTGGAAGTAGAGCTGTTGTTATGCCTGGTGTTGTTTTGGAAAATGAGGCTAATGTTGGCGCTTTGTCACTTGTAATGAAAGAAGAAATTGTTAGGTCAAGGTGA 6159 0.3889 MNTERSIEDQFSKLHPSLPENTRIGIIGAGPSGLSAAYALTRLGYKNVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPVIFHLAKETGSELEEMDSHKLAVVDPSSGEYQDIKVADDYVSVMSLTLQIQEKVKNCGRLGIHAVSDIASDLTPEYLQCHGLKSIPKSVAYGYTASGYGFIQDMPYAYLHEFTRTSMAGKIRRFKGGYTSLWQKIAESLPLRLLCNTEVLAIKRNSDSVNVDIKRLNVVETLEFDKIIISGSFPLKYGRIYQSPSTCIESEKGVMDASDLEKDLFSKVETNDYYTTVLKIKGLEHFPIGFYYFNKYMEDPSTIGNPVAMQKFYADSNIFLFWSYGNSVDIKGPTVKELAMKTIEAMGGEVESFILLRCFKYFPHVSSQDMKDGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALVCKNFANSNELPTFPYTKNLFPLQTESQKKNPKELGELPEVQFPNLPTLNSYLNYWGTHPITQNRTLYTWINEEGNPVCRRTFREQHFYSSCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPIIPPDPMQRGGQALMKIENIAKSCGIVAILSTISYHSAVRAGSLKNLISLTRKNGKSSARWPNLPWLHTDTWVKNSKNIVLEDLDDQCEPQPGDTCFLQFTSGSTGDAKGVMISHGGLIHNVKLMQRRYKSTSRTKLVSWLPQYHDMGLIGGLFTSLVSGGTAILFSPMTFIKKPLLWLEIISKYQATHSAGPNFAFELLIRRLEADKDKVQNLDLSSLVFLMVAAEPVRQKTLKRFIELTTPLGLSQKVMAPGYGLAENCVFVSCAFGEGGPLIVDWQGRVCCGYVRPEDTDIDIRIVDPDTCEELHVDGKEGEIWISSPSAGVGYWGREELSQKTFMNQLANRPGSNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSSDVEKTIETSSEFLRPGCCAVIGVPEEILSAKGISIPEGSDHVALVVIAEVRDGRSVSKDVIEKIKVRVAEEHGVSLASVKLIKPRTISKTTSGKIKRFECIKQFTDETLNLVPLGTKPMLTKKSLVWSFTTTATCREEKPVRLKLVRCSPVPSKRINKSDIVEFLKVLISEQTGVPINNVSVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCILELATFSEDLLSKTRPQIVRSVPIPTKRVSKSDIVEFLKVLISEQTGVAINKISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCITELANFSEDLLSKTQPQLPSNPTDVPEADIDCTESAVEVSKSHQWGIRLLQFLALIYISIMLAWPAYLSITAFLNSSMCVSKSVAGVPWLNYIMSLIFAPLAWILCITSTCVCISLFGSSLLGPNCELASDISIYSMDFVKWWALYKAQEISSKVLAAHLRGTVFLKYWFEMFGARIGSSVLLDTVDITDPALVSIGDEVVISEGVLVQSHEVKNGILSLHPIKIGKCSSIGPYAVVQKGSVIGESAEVQALQKVGRGEHVLKPDKVNNIDKNADLPIINSKTQYDAIYHFIGIYLVGFLSSLAAAIAYFLYIKLSKQPPSLQHFSFVCICGAFHWIPFTAIAYATMFSDVPSNPITFAMTFTSAYLLHGLILITLTAVFTRLLICNQNKTEFKTWLLRQMNISCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGAGVHLGDFSKIITGFHSSNGYASGKIEVQDNSVIGSQSLILPGSLIQKNVILGALSLAPMNSILQEGGLYIGSQSHVSNLTAPLHKQDSQKVTLTLTRTWYQTFTSLFIQPFLQTALPHILLALSIYPPLNLIFHLKNTKKVPIFWLLPLFWILSGILAALTCVIAKWVLIGRKKKGEKIPIWSKSIIFDSTWQAIRTLIGDYFMEMTCGSFMFVIWMKMMGVDVNIGDDDVYVDSMGTLLNPEMVKIEKGGCVGKEALLFGHIYEGDEGGMVKFGEIKIGENGFVGSRAVVMPGVVLENEANVGALSLVMKEEIVRSR 2052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02205 2052 Gene3D Hexapeptide repeat proteins 1708 1815 - -
Tsu02g02205 2052 Gene3D - 952 1078 IPR045851 -
Tsu02g02205 2052 PANTHER AMP-BINDING ENZYME 1208 1810 - -
Tsu02g02205 2052 PANTHER AMP-BINDING ENZYME 1814 2052 - -
Tsu02g02205 2052 PANTHER AMP-BINDING ENZYME 1 1207 - -
Tsu02g02205 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1443 1540 IPR011004 -
Tsu02g02205 2052 Pfam Phosphopantetheine attachment site 1130 1192 IPR009081 -
Tsu02g02205 2052 Pfam Phosphopantetheine attachment site 1225 1288 IPR009081 -
Tsu02g02205 2052 Pfam AMP-binding enzyme 522 957 IPR000873 -
Tsu02g02205 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1894 2045 IPR011004 -
Tsu02g02205 2052 Gene3D - 23 445 IPR036188 -
Tsu02g02205 2052 CDD FAAL 508 1071 IPR040097 GO:0008610
Tsu02g02205 2052 SUPERFAMILY Trimeric LpxA-like enzymes 1706 1797 IPR011004 -
Tsu02g02205 2052 ProSitePatterns Putative AMP-binding domain signature. 679 690 IPR020845 -
Tsu02g02205 2052 SUPERFAMILY ACP-like 1217 1308 IPR036736 -
Tsu02g02205 2052 SUPERFAMILY Calcium ATPase, transmembrane domain M 1332 1906 IPR023298 -
Tsu02g02205 2052 SUPERFAMILY FAD/NAD(P)-binding domain 20 271 IPR036188 -
Tsu02g02205 2052 SUPERFAMILY ACP-like 1122 1206 IPR036736 -
Tsu02g02205 2052 Gene3D - 94 202 - -
Tsu02g02205 2052 SMART Phosphopantetheine attachment site 1222 1293 IPR020806 GO:0031177
Tsu02g02205 2052 SMART Phosphopantetheine attachment site 1127 1198 IPR020806 GO:0031177
Tsu02g02205 2052 Pfam Flavin containing amine oxidoreductase 32 267 IPR002937 GO:0016491
Tsu02g02205 2052 PRINTS Adrenodoxin reductase family signature 23 45 - -
Tsu02g02205 2052 PRINTS Adrenodoxin reductase family signature 47 60 - -
Tsu02g02205 2052 ProSitePatterns Phosphopantetheine attachment site. 1153 1168 IPR006162 -
Tsu02g02205 2052 Gene3D Hexapeptide repeat proteins 1925 2049 - -
Tsu02g02205 2052 ProSiteProfiles Carrier protein (CP) domain profile. 1124 1198 IPR009081 -
Tsu02g02205 2052 Gene3D - 302 395 - -
Tsu02g02205 2052 PANTHER AMINE OXIDASE 1208 1810 - -
Tsu02g02205 2052 PANTHER AMINE OXIDASE 1814 2052 - -
Tsu02g02205 2052 PANTHER AMINE OXIDASE 1 1207 - -
Tsu02g02205 2052 Gene3D - 480 951 IPR042099 -
Tsu02g02205 2052 Gene3D - 1116 1196 IPR036736 -
Tsu02g02205 2052 Gene3D - 1211 1291 IPR036736 -
Tsu02g02205 2052 ProSiteProfiles Carrier protein (CP) domain profile. 1219 1293 IPR009081 -
Tsu02g02205 2052 SUPERFAMILY Acetyl-CoA synthetase-like 498 1076 - -
Tsu02g02205 2052 ProSitePatterns Phosphopantetheine attachment site. 1248 1263 IPR006162 -
Tsu02g02205 2052 Gene3D Hexapeptide repeat proteins 1428 1540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02205 Tsu-Chr2 21797576 21804796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02205 675 990 Monolignol Biosynthesis Gene Families AT1G20480 26.814 5.62e-21 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02205 - - cam:101499614 3612.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05276 02 61583022 61591292 Tsu02g02205 02 21797576 21804796 PCT