Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02203 ATGAGTCTCCATAATCATTCAAATAAGGATTTCAAAGTAACAGATGATGAACTTCTTCAATCATTCCTCTACAACAAAATTCATAATAAACCTTTGCCCGATTATATGACCATTCTCGAATACGATTTATTCGGTACCATAAAAAATCCTTGTGAGATTTGGGAAGAGTTTGCAGCTTCTCACTCATATAGTGGAAAAGACCTGTATTTTTTCAGTACCTTAAAGAAGAAATCAGCCACTAGCACACGCATTGATCGCACTATTGGAACTGGTTCATGGGAAGGTGAAGATAGCGGAAAAAGTATATTCGCTAAAAATACAAACCAACTTCTCGGTATAAGAAAACGTTATCGCTTTGAAAAGAGTAAGATTGATCCAGATGGTGGATGGATCTTACACGAATATAGCCTTGACCAATCTTTGATAAGTAATCCTTCGgcCAATAATTATGTTCTATGTAGATTTAGAAAGAATGTGAAACTGGATACACAAAATACAGGAATAAGAATAAATCACCAATCCAATTCAAACAGAAATTCAAGAGCAAAGAATGTTggacaaaataaacaaagaaaaaccgtTGTTCCTCCACGTGCGGCGACAACAACCACCATATCTGGCAGTAATACTTTGTTGAGAAAATCTACAATTTATGAACCGATAAACCAATCAAATGGTGAACACGACAAGACAAATGTGGTTAATGAAGAGTCTCAATATAAAGAAGGTATGGAAAATATTTGGCCAGAAAACATCAATATCGTTCTTGCACTCGAGGCTACGCCCAAATCTGAGAACAATAGTGAACTTAACAAAGAACATGTTGAATGCATTATGAACAaagaagatgatggtgataTCATTATAAATACAGAAGATGATAGCAATGAAGAAGAGGGTGATGACATTATGTCTTGGCCTAAAAACTTTTCACAAGAGTTAATAAACAAGAATGAAGGTTGCCTGATGGGAGATGAAAATTTTGACACGAAAGAGTCTTTGATGCTTGCTGTGATTTTTCGCAAGGAGTTGTTGGTACGTGAATCAATTCGTGTTGGTGGTCGGCTCATTCGTCGTCTTGAGTTGTAA 1089 0.3453 MSLHNHSNKDFKVTDDELLQSFLYNKIHNKPLPDYMTILEYDLFGTIKNPCEIWEEFAASHSYSGKDLYFFSTLKKKSATSTRIDRTIGTGSWEGEDSGKSIFAKNTNQLLGIRKRYRFEKSKIDPDGGWILHEYSLDQSLISNPSANNYVLCRFRKNVKLDTQNTGIRINHQSNSNRNSRAKNVGQNKQRKTVVPPRAATTTTISGSNTLLRKSTIYEPINQSNGEHDKTNVVNEESQYKEGMENIWPENINIVLALEATPKSENNSELNKEHVECIMNKEDDGDIIINTEDDSNEEEGDDIMSWPKNFSQELINKNEGCLMGDENFDTKESLMLAVIFRKELLVRESIRVGGRLIRRLEL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02203 362 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 289 - -
Tsu02g02203 362 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Tsu02g02203 362 Gene3D NAC domain 14 161 IPR036093 GO:0003677|GO:0006355
Tsu02g02203 362 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 289 - -
Tsu02g02203 362 SUPERFAMILY NAC domain 11 156 IPR036093 GO:0003677|GO:0006355
Tsu02g02203 362 MobiDBLite consensus disorder prediction 170 195 - -
Tsu02g02203 362 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02203 Tsu-Chr2 21773702 21778804 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02203 11 165 NAC Transcription Factor Family AT5G62380 34.591 1.26e-15 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g02203 NAM 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02203 - - cam:101507022 313.153