Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02201 ATGTCAAAAACCACCGCATCCGCCATCGGCTCTCCCTGTAACGACCTCAATACACCAACACTAGACACAGAGTCTCCCACGCTACTCCACTCCATTTCAGAGCACGGAGGATACGCCTACGTGAGAATGGCATCACTAGCTGCCGCCGGCGACATTCGAGCAGCAGAAGCCGTTAGAGAGATGGCGTGGGAACAACTTCATTCTGGACCGTGGCACTCGGTGTTGCCGGTGTGGCGTGACGCTTACTCGATGGCGTGTCTTCATGTGGCAAAGCATCACTATAGAAACGGTGAGTTTAAGGAAGCGCTTAAGGCTTTGGATATGGGGATTATCATGGGAGGGAATCTTCTTAGGAAAGATTTGGATTCTGCTATTGGTAAGGTTTCTGAAAAAGCTAGGAATATTAGGGTTTCTGATGGAAACTACCAAGATTTTGGTAACTTTGAGCATCGACTTGTTGAGCATGATTTTGATGTGTCCAAGGTGCTCCAGCTTTTACCTGTTAAGTCCCTTGCTTCTAAGCTTGTGGTGAAGAGGTCCTCACTGTCGTTGGAGAAGTTCCTGAAAGATCATTACCTGTCTGGCACCCCAGTTATCATTAGTGATTGTATGGCACACTGGCCAGCCAAGAAAAACTGGAATAATATAGATTACTTGCTCAAAGTTGCTGGTGACCGCACTGTTCCGGTCGAGGTTGGGAAAAACTATTTATGTGCAGATTGGAAGCAAGAGCTAGTTACATTTTCGGAGTTTCTTGAGCGGATAAGGTCCCATAGCTGTTCTCCTGTTGGTCCGACATATCTTGCTCAGCATCCATTATTTGATCAGATAAATGAGCTTCGGAGAGATATCTTTATTCCTGACTATTGTTTTGCTGGTGGAGGAGAGCTAAGATCTCTCAATGCTTGGTTTGGTCCAGCTGGAACAGTAACACCATTACACCATGACCCACATCATAACATACTAGCACAGGTTGTTGGGAAAAAATACATTAGGCTTTATCCAGCATCTGTGTCTGAGGAACTTTTCCCCTACTCGGAAACCATGCTTAGCAATTCCAGccagGTTGATTTAGATGATATAGACGAAAGGAAGTTTCCTAAGGTACAAGACTTGGAATTTGTAGACTGTATTTTAGAGGAAGGTGAAATGTTATACATCCCGCCAAAATGGTGGCACTATGTGCGATCTTTAACTACCAGTTTGTCAGTTAGCTTTTGGTGGAGTGAGGGTGAAAGTTCATCTCCGTCCTAA 1254 0.449 MSKTTASAIGSPCNDLNTPTLDTESPTLLHSISEHGGYAYVRMASLAAAGDIRAAEAVREMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKHHYRNGEFKEALKALDMGIIMGGNLLRKDLDSAIGKVSEKARNIRVSDGNYQDFGNFEHRLVEHDFDVSKVLQLLPVKSLASKLVVKRSSLSLEKFLKDHYLSGTPVIISDCMAHWPAKKNWNNIDYLLKVAGDRTVPVEVGKNYLCADWKQELVTFSEFLERIRSHSCSPVGPTYLAQHPLFDQINELRRDIFIPDYCFAGGGELRSLNAWFGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPASVSEELFPYSETMLSNSSQVDLDDIDERKFPKVQDLEFVDCILEEGEMLYIPPKWWHYVRSLTTSLSVSFWWSEGESSSPS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02201 417 PANTHER - 36 411 - -
Tsu02g02201 417 MobiDBLite consensus disorder prediction 1 20 - -
Tsu02g02201 417 Pfam Cupin-like domain 186 410 IPR041667 -
Tsu02g02201 417 Gene3D Cupin 175 409 - -
Tsu02g02201 417 SMART cupin_9 266 414 IPR003347 -
Tsu02g02201 417 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 36 411 - -
Tsu02g02201 417 ProSiteProfiles JmjC domain profile. 260 417 IPR003347 -
Tsu02g02201 417 SUPERFAMILY Clavaminate synthase-like 180 409 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02201 170 408 Acyl Lipid Metabolism Gene Families AT3G45880 25.338 4.18e-14 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tsu02g02201 Cupin_8 8.8e-49 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02201 K24444 - gmx:100813075 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02201 02 21755277 21759916 Tsu02g02201 02 21755277 21759916 ECH