Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02197 ATGGTGACCGAAAGAATTAAGCTGAATGGAGGCACCTCCACTTTGGTGGTTCGCATTAGAAATCTTCTTGCTTTTGAGTTGGCAATAATCAAACTTCGTTGTCAGACAAAGAAACCTTTTAAATACGGAACACTGACACACACAATCGACGCATCTCTCTCTCTTCGCTTTTGGTTTCTCTCTCCTCATTCATCCCCAAATCTTCTAGGGATTCATGATCGGTGCGATTCGGAGCTTGTAGATCCGTGTCAAGGTTTCGTTTCCtggattttttttgaacaaaattttTTCGAATCGATTTTTTTCCTCGCCAAAAGGAAAGTTGACAAGATGGAACATGAAAAGACGGAATGTCAAGCTCCCCCGGAAGGTCCTATGTTGTGCATCAACAACTGTGGATTTTTCGGAAGTGCAGCTACCATGAACATGTGTTCCAAGTGCCACAAAGACATGATGCTGAAACAAGAGCAGGCCCAGCTTGCAGCATCATCCCTTGGCAATATTATGAATGGGTCTACAAGCAACAACACTGAAAAAGAATCTGTTGTTGCGGCCAGTGTGGATATTGCAGCCATTTTTGCGGAACCTAAAAAAAGTATCAATAAGCCATTTTCATTTGGCTCAACTTCAGAGGAAAGTGGCGATGCAAAGCCAAAGGATGGACCAAAACGTTGCAGCAACTGCAATAAGCGAGTTGGTTTGACAGGGTTCAATTGTCGATGTGGTAATGTTTTCTGTGCTTTACATCGCTACTCAGACAAGCATGATTGCCCGTTTGATTACCGCACTGCTGCACAAGATGCCATAGCTAAAGCAAACCCAGTTGTGAAGGCTGAGAAGCTTGATAAGATCTAA 855 0.4257 MVTERIKLNGGTSTLVVRIRNLLAFELAIIKLRCQTKKPFKYGTLTHTIDASLSLRFWFLSPHSSPNLLGIHDRCDSELVDPCQGFVSWIFFEQNFFESIFFLAKRKVDKMEHEKTECQAPPEGPMLCINNCGFFGSAATMNMCSKCHKDMMLKQEQAQLAASSLGNIMNGSTSNNTEKESVVAASVDIAAIFAEPKKSINKPFSFGSTSEESGDAKPKDGPKRCSNCNKRVGLTGFNCRCGNVFCALHRYSDKHDCPFDYRTAAQDAIAKANPVVKAEKLDKI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02197 284 Gene3D - 205 280 IPR035896 -
Tsu02g02197 284 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 127 163 - -
Tsu02g02197 284 SMART AN1_Zf_4 225 262 IPR000058 GO:0008270
Tsu02g02197 284 Pfam AN1-like Zinc finger 225 261 IPR000058 GO:0008270
Tsu02g02197 284 PANTHER AN1-TYPE ZINC FINGER PROTEIN 111 284 - -
Tsu02g02197 284 SUPERFAMILY AN1-like Zinc finger 210 279 IPR035896 -
Tsu02g02197 284 Gene3D - 109 177 - -
Tsu02g02197 284 MobiDBLite consensus disorder prediction 204 223 - -
Tsu02g02197 284 ProSiteProfiles Zinc finger A20-type profile. 122 156 IPR002653 GO:0003677|GO:0008270
Tsu02g02197 284 Pfam A20-like zinc finger 126 149 IPR002653 GO:0003677|GO:0008270
Tsu02g02197 284 PANTHER ZINC FINGER AN1 DOMAIN STRESS-ASSOCIATED PROTEIN 111 284 - -
Tsu02g02197 284 SMART A20_3 125 149 IPR002653 GO:0003677|GO:0008270
Tsu02g02197 284 ProSiteProfiles Zinc finger AN1-type profile. 219 265 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02197 Tsu-Chr2 21727784 21731999 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02197 114 284 C2H2 Transcription Factor Family AT3G52800 41.520 5.15e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02197 - - gmx:100500070 281.567