Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02195 ATGGAACCAGCTCCACCCTCATTGGAGCTAGACCTTCACAACCTTAAAGCACTCAAAATCCTAGGCAAAGGTGCCATGGGCACTGTCTTCCTCATCCACCACCCTCCCACCACCTCAACCACCACAACCGCCACCACATTCGCCCTCAAAGTCGTCGATAAAACCTCCGTCCACGCCAAACTCGACGCCGAACGTCGCGCCCGTTGGGAAATCCAAGTCCTCTCAACCCTCTCCCATCCTTTCCTCCCTTCCATTCTTGGAACATATGAGTCTCCACAATTCTTAGCATGGGCCCTACCTTATTGTCCTGGTGGTGACCTTAATGTCCTTCGTTATCACCAAAACGACCGCGTTTTCTCTCCTTGTGTTATCCGTTTCTATATAGCTGAAATCCTCTGCGCTCTCGACCACCTTCATTCCATGGGCATCGCTTATCGTGACTTAAAACCCGAAAATGTCCTCATTCAACATTCCGGCCACGTCACATTAACCGATTTTGATCTCTCTCGAAAACTTAACCCAAAAACtgttacaaataataataataaaaccgTTGATTCTAATTTACCTTCACATGATAGAAACCTTCCAGAATCTTCTAGAAAACACCGACGGAATTTCTCGCGGTGGATCCCACTATCGTCggaaacttctcagcaacttcaACACAAGATGAatggtttgaatttgaagaaaGCGAAGTCGGCACGAGTTAGTCCGGTGAGTCGTCGGAAAATGAGTTTCTCAAACGGTGAACGGTCTAATTCGTTCGTTGGAACGGAGGAGTATGTTTCACCGGAGGTTGTTCGCGGTGACGGTCATGAATTTGCTGTTGATTGGTGGGCGTTAGGGATTCTTATGTACGAAATGATGTACGGTACGACGCCGTTTAAGGGGAAGAATCGGAAGGAAACGTTTAAAAATGTTCTGACGAAGTCGCCGGAGTTTGTTGGAAAAAAGTCGGAGTTGACGGATTTGATAGAGAAGTTGTTGGCGAAGGATCCTAAGAAGAGATTGGGTTATTCGCGTGGTGCTGTTGAGATCAAAGAGCATAAGTTTTTCATAGGGGTTGATTGGAAAATGTTGATAGAAGTAATGCGGCCGCCGTTTATTCCGGCGAGAGATGACGGTAATGGAGAATTGTTATCGGAGAAGTATTCCAATGGCGGTGTGGATATTAAGGAATATTTTCAGCGGTTGAAAACACCTCCGTCGCTGCATCCTTCGCCCACAGCGTCGCCGTCTCCGAATAGGTTTAAAACGAAAAATGTTTCCTTAACGGAATTCTGA 1290 0.4473 MEPAPPSLELDLHNLKALKILGKGAMGTVFLIHHPPTTSTTTTATTFALKVVDKTSVHAKLDAERRARWEIQVLSTLSHPFLPSILGTYESPQFLAWALPYCPGGDLNVLRYHQNDRVFSPCVIRFYIAEILCALDHLHSMGIAYRDLKPENVLIQHSGHVTLTDFDLSRKLNPKTVTNNNNKTVDSNLPSHDRNLPESSRKHRRNFSRWIPLSSETSQQLQHKMNGLNLKKAKSARVSPVSRRKMSFSNGERSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILMYEMMYGTTPFKGKNRKETFKNVLTKSPEFVGKKSELTDLIEKLLAKDPKKRLGYSRGAVEIKEHKFFIGVDWKMLIEVMRPPFIPARDDGNGELLSEKYSNGGVDIKEYFQRLKTPPSLHPSPTASPSPNRFKTKNVSLTEF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02195 429 Pfam Protein kinase domain 249 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02195 429 Pfam Protein kinase domain 17 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02195 429 ProSiteProfiles Protein kinase domain profile. 15 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02195 429 PANTHER FLIPPASE KINASE 1-RELATED 10 404 - -
Tsu02g02195 429 Gene3D Phosphorylase Kinase; domain 1 15 105 - -
Tsu02g02195 429 MobiDBLite consensus disorder prediction 231 253 - -
Tsu02g02195 429 SUPERFAMILY Protein kinase-like (PK-like) 14 417 IPR011009 -
Tsu02g02195 429 Gene3D Transferase(Phosphotransferase) domain 1 249 373 - -
Tsu02g02195 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Tsu02g02195 429 Gene3D Transferase(Phosphotransferase) domain 1 106 180 - -
Tsu02g02195 429 MobiDBLite consensus disorder prediction 412 429 - -
Tsu02g02195 429 PANTHER SERINE/THREONINE-PROTEIN KINASE UCNL 10 404 - -
Tsu02g02195 429 MobiDBLite consensus disorder prediction 174 194 - -
Tsu02g02195 429 MobiDBLite consensus disorder prediction 174 204 - -
Tsu02g02195 429 MobiDBLite consensus disorder prediction 401 429 - -
Tsu02g02195 429 SMART serkin_6 15 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02195 429 ProSitePatterns Protein kinases ATP-binding region signature. 21 50 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02195 Tsu-Chr2 21671720 21673261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02195 10 429 AGC Kinase Gene Family AT3G20830 57.343 1.85e-162 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tsu02g02195 Pkinase 8.8e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02195 - K08286 gmx:100785281 600.127