Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02189 ATGGCACCAAAGTCATCAACCAATGGTACCACCATGATGATGGGTCACAAAATGCATGGAATGATGATGCATATGACTTTCTTTTGGGGAAAAGATACATTGATTCTATTTAATGGTTTTCCTGCCGGTAACACTGGTCATTATGTATTGGCACTTTTCATGATATTCATCATGTCAATCCTCATTGAGTTCATCTCTCATACTCGATTCATCAAACCTCATACCAATCCTATGGTGGCCCGTTTCATTCAGACACTTCTCCATTTTCTTAGGATCAGCCTAGCTTACTTGGTGATGTTGGCTCTCATGTCTTTCAATGGCGGAGTTTTCTTGGTTGCTATCCTTGGCCATGCTCTCGGCTTCTTCTTTAGTACCCGTGCTTACAAAGAACCACATCAACCTTTTGATCTTCCTCCTATGACTTGTTGA 429 0.4126 MAPKSSTNGTTMMMGHKMHGMMMHMTFFWGKDTLILFNGFPAGNTGHYVLALFMIFIMSILIEFISHTRFIKPHTNPMVARFIQTLLHFLRISLAYLVMLALMSFNGGVFLVAILGHALGFFFSTRAYKEPHQPFDLPPMTC 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02189 142 Pfam Ctr copper transporter family 78 123 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu02g02189 142 PANTHER COPPER TRANSPORTER 1 6 141 - -
Tsu02g02189 142 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 6 141 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02189 Tsu-Chr2 21548787 21549215 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02189 26 142 Inorganic Solute Cotransporters AT5G59030 43.548 1.27e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02189 K14686 - gmx:100306175 177.178