Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02185 ATGAATATGCAGCACGGTGGAATGGATGGGATGTCAATGgcaccaaaatcatcatcaaccaatGGTACTACAATGATGATGGGTCATAAGATGCGCGGAATGATGCATATGACATTCTTTTGGGGTACGGATGCTTTGATTCTCTTCGATGGTTGGCCTGCAGGTAACACTGGTCACTATCTATTGGCATTGTTCATGGTTTTCGCCATGTCCATACTCATTGAGTTATTGTCCCACACACGGTTCGTCAAACCCAATTCCAACCCTACGGTGGCCGGTCTAGTTCAGACACTTTTGCATGTTCTTAGGGTTGGGTTAGCTTATTTGGTTATGTTGGCACTTATGTCTTTTAATGGTGGTGTGTTCTTAGTTGCTGTTCTTGGTCATGCTATTGGATTCTTCTTCTGTAGCCGTGCTTTCAGAAAACCACTTCATGATGATAAGACTTATGATCTTCCTCCTATGGCTTgttaa 474 0.4093 MNMQHGGMDGMSMAPKSSSTNGTTMMMGHKMRGMMHMTFFWGTDALILFDGWPAGNTGHYLLALFMVFAMSILIELLSHTRFVKPNSNPTVAGLVQTLLHVLRVGLAYLVMLALMSFNGGVFLVAVLGHAIGFFFCSRAFRKPLHDDKTYDLPPMAC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02185 157 Pfam Ctr copper transporter family 84 136 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu02g02185 157 Pfam Ctr copper transporter family 37 82 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tsu02g02185 157 PANTHER COPPER TRANSPORTER 1 9 156 - -
Tsu02g02185 157 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 9 156 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02185 Tsu-Chr2 21516137 21516610 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02185 38 157 Inorganic Solute Cotransporters AT5G59030 49.194 4.19e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02185 K14686 - gmx:100306175 195.282