Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02174 ATGGGAAGTTTTGAGAGAGACCTAAAGAATATGAGAGAATATTTTAGGAGTGGAAAAACAAAGGAAGCATCATGGAGAGAATCACAGCTAAAAGGATTGCGTCTTTTCCTTATGGAAAAAGAGAATGATATCTTTAAGGCACTCATGCAAGATTTAGGGAAACATCGTATTGAAGCTTTTAGAGATGAGATAGGAACTTTAGTGAAGACCTTAAATCTCGCATTAAAGTCTCTTAAGGATTGGATGTCAAGCAAGAAGgcTCCACTACCATCAATAGCATTGCTTTCAAGTGCAGAAATTATTCATGAACCTCTTGGTCTTGTCCTCATTATTTCATCTTGGAATTTCCCATTTgggGTGTCATTGGAGCCACTAATAGGAGCAATAACTGCTGGAAATACAGCAGTATTAAAACCTTCAGAGTTGTCTCCTGCATGTTCCTCTTTACTTGCTTCTGGCATTGCAACTTACTTGGATAATAAAGCCATTAAGGTTGTAGAAGGGGGCCCAGAAGAATCAGAGCAATTGTTACAACAAAGATGGGACAAAATCTTTTTTACAGGCAGCGGACGAGTGGGGCGCATTGTGATGTCTGCAGCTGCGAAGCACTTGACCCCTGTAACACTGGAGTTGGGTAGTAAATGCCCTGCTGTTGTGGACTCCCTTACATCTTCTTGGGACTTAGAGGTGACTGTGAAGCGGATTATTGTGGGAAAATATGGAACTTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCCTTGTGGAAAAGAGTTACTATCCAAAACTGGTTGAATTGATGAAGGTGTGGATCAAGAAAATGTTTGGAGACAACCCAAAATATTCCAACTCTATAGCAAGGATAGTTAATAAACAACACTTAAATAGATTGAAGAAACTTCTTACTGAAAAAAAAGTTAAGGAATCTGTGGTTTATGGTGGCTCAGTGGATGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCACCACTTGATTCAACAATAATGATAGATGAAGTTTTTGGCCCATTACTTCCAATTATTACTGTTGATAAGATTGAGGACAGTATTGAATTCATAAGCTCTAGGCCTAAACCTCTAGCCCTTTATGTTTTCTCCAAAAACAAAACACTGCAGAACAGAATGATATCTGAAACATCATCTGGAAGCGTTACATTCAACGACGCAATTCTACAATATGCTGCAGATTCTCTACCATTTGGAGGAGTAGGTGCAAGTGGATTTGGCATGTACCATGGAAAATTCTCCTTTGACACATTCAGTCACCAGAAGGCTATTGTTAGAAGAAGTTTCTTAACTGATTTTTGGTATAGGTATCCACCATGGACAGCAAATAAGTTTCAACTACTTGAAGTCTCTTACAATTATGATTATCTGGGATTGGTCCTTGTTGTTCTTGGATTAAAGAGACCTTCAAAACGCCAGATCATACCTTGTTAG 1470 0.385 MGSFERDLKNMREYFRSGKTKEASWRESQLKGLRLFLMEKENDIFKALMQDLGKHRIEAFRDEIGTLVKTLNLALKSLKDWMSSKKAPLPSIALLSSAEIIHEPLGLVLIISSWNFPFGVSLEPLIGAITAGNTAVLKPSELSPACSSLLASGIATYLDNKAIKVVEGGPEESEQLLQQRWDKIFFTGSGRVGRIVMSAAAKHLTPVTLELGSKCPAVVDSLTSSWDLEVTVKRIIVGKYGTCAGQACIAIDYVLVEKSYYPKLVELMKVWIKKMFGDNPKYSNSIARIVNKQHLNRLKKLLTEKKVKESVVYGGSVDEENLFIEPTILVDPPLDSTIMIDEVFGPLLPIITVDKIEDSIEFISSRPKPLALYVFSKNKTLQNRMISETSSGSVTFNDAILQYAADSLPFGGVGASGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTANKFQLLEVSYNYDYLGLVLVVLGLKRPSKRQIIPC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02174 489 PIRSF ALDH 2 472 IPR012394 GO:0006081
Tsu02g02174 489 Pfam Aldehyde dehydrogenase family 8 436 IPR015590 GO:0016491
Tsu02g02174 489 SUPERFAMILY ALDH-like 8 453 IPR016161 GO:0016491
Tsu02g02174 489 PANTHER ALDEHYDE DEHYDROGENASE 4 486 - -
Tsu02g02174 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Tsu02g02174 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Tsu02g02174 489 PANTHER ALDEHYDE DEHYDROGENASE 4 486 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02174 Tsu-Chr2 21381908 21387758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02174 3 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.184 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02174 K00128 - gmx:100817701 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02174 02 21381908 21387758 Tsu02g02174 02 21381908 21387758 ECH
Tsu02g05238 02 61257406 61262339 Tsu02g02174 02 21381908 21387758 PCT