Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02168 ATGGCTTCCATTCCTCTCACCACCACCGCCACTCTCCTCCCATCTCTCCGCCACCGTTCCTCCCCACAACTCCGCCACTTCCATTCCACCACCACACTCAAACCCCTCAAATCACTCCGCCACTCTTCCATTTCCACCTCCTCCCCTCTCCCACACTCAAACCTcatttcttcaaattcaaaacgCAACACTCTCGTTGTTAAAGCTTCATCAGCTTCAATCACACCAGCTCCGGCACCGGCTCCAGCACCGGCTCAGCCATGGCAAGGCGCTGCAATAAAACCACTCTTAGCATCAATAGCAACCGGAGTTATACTCTGGTTCGTTCCCACTCCGGAAGGTGTATCAAGAAAAGCGTGGCAGTTACTCGCAATTTTCTTAGGAACAATCGTCGGAATCATCACACAACCATTACCACTCGGTGCCGTCGCGATTTTAGGTTTAGGAGTTTCTGTTCTCACCAAAACCCTACCCTTTGTTGCTGCATTTTCTGGTTTCGGTGATCCAATTCCATGGTTAATTTGTCTCGCATTTTTCTTCGCTAAAGGTTTCATTAAAACTGGATTAGGTAATCGTGTTGCGTATCAATTCGTTTCGCTTTTCGGTAGTTCTTCGTTAGGGTTAGGTTATAGTTTGGTTTTTAGTGAAGCTTTATTAGCACCGGCGATTCCTTCGGTTTCGGCTAGAGCTGGTGGGATTTTTCTACCATTGGTTAAGTCTTTGTGTGTTGCTTGTGGAAGTAATGTTGGTGATGGAACTGAGAATAAGCTTGGTTCTTGGTTGATGCTTACTTGTTTTCAGACTTCTTGTATTTCGTCGGCTATGTTTTTGACTGCAATGGCTGCGAATCCGCTTTGTGCTACGCTTACTTTGAGTTCGATTAACCAGACAATTGGTTGGTTGGATTGGGCCAAAGCTGCTATTGTGCCTGGTTTGGTGTCGTTGATATTGGTGCCGTTGATTTTGTATGTTATTTATCCACCTACCTTGAAATCTAGTCCTGATGCACCTAAGCTTGCTAGGGAAAAGTTGGAGAAAATGGGGCCTATGACAAGCAATGAGAAAATCATGACTGCTACTCTGTTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGATTCTTAATATAGATGCTGTAACTTCTGCCATTCTTGGATTAGCCATACTCCTCATCACCGGAGTTGTAACATGGAAAGAGTGCTTAGCTGAGGGTGTTGCATGGGATACACTCACATGGTTTGCTGCCCTCATTGCAATGGCCGGGTATTTGAACAAATATGGTCTCATCGCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCTTTTGGTATTCTGGTCCTCCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTTGGGACTCCACCATTCTTCGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTCATGGGAGGCCTTACTCATTATGGGATTGGTTCAGCTCCAGTGTTTTTCGGTGCCAACTATGTCCCACTTGCCCAATGGTGGGGTTATGGCTTTGTTATTAGTATTGTGAACATTATAATCTGGCTTGGACTCGGGTCTATTTGGTGGAAAGCCATTGGCTTGTGGTAA 1677 0.4532 MASIPLTTTATLLPSLRHRSSPQLRHFHSTTTLKPLKSLRHSSISTSSPLPHSNLISSNSKRNTLVVKASSASITPAPAPAPAPAQPWQGAAIKPLLASIATGVILWFVPTPEGVSRKAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFVAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNVGDGTENKLGSWLMLTCFQTSCISSAMFLTAMAANPLCATLTLSSINQTIGWLDWAKAAIVPGLVSLILVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMTSNEKIMTATLFLTVGLWVFGGILNIDAVTSAILGLAILLITGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLIAWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAQWWGYGFVISIVNIIIWLGLGSIWWKAIGLW 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02168 558 Pfam Sodium:sulfate symporter transmembrane region 95 558 IPR001898 GO:0016020|GO:0022857|GO:0055085
Tsu02g02168 558 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 15 558 - -
Tsu02g02168 558 TIGRFAM dass: transporter, divalent anion:Na+ symporter (DASS) family 110 552 IPR001898 GO:0016020|GO:0022857|GO:0055085
Tsu02g02168 558 CDD ArsB_NhaD_permease 130 552 - -
Tsu02g02168 558 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 15 558 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02168 Tsu-Chr2 21291973 21295677 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02168 1 557 Antiporters AT5G12860 78.431 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02168 - - gmx:100796365 879.782
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02168 02 21291973 21295677 Tsu02g02168 02 21291973 21295677 ECH