Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02167 ATGGGAGTTCGTTGCTCTAAACTTTCTCTATGCTGGTGGCCTTCTCATATcaaatcaaatcatcaaaactTCTCTGATAATAATGATGATGATGGGAACAAGAAACAGAAGGATACTGGTGTTGGTTTTACTGAGTATAGCTTAGATCAACTTAGAGTTGCTACTGAAGGATTTTCATCAGACAACATTGTATCTGAACATGGTGAAAAAGCTCCTAATGTTGTCTACAGAGGTTGTCTTGAAGATGATAGGTTGGTTGCTGTGAAACGTTTCAACAAATCTGCTTGGCCTGATTCTAGACAGTTTCTGGAGGAAGCAAGAGCGGTGGGAGAGTTAAGGAGTGAAAGATTAGCTAATTTGGTTGGTTGTTGCTGTGATGGAGAAGAGAGATTGCTTGTTGCTGAGTTCTTGCCAAATGAAACTCTCTCTAAACATCTTTTTCATTGGGATGTCCAACCTATGAAATGGGCAATGAGGCTGAGGGTGGCTTTGTATTTAGCACAAGCCTTGGAATACTGCAATAGCAAAGGAAGAGCATTGTACCATGATCTTAATGCTTATCGAATTTTGTTTGATCAGGAAGGAAACCCTAGACTCTCTTGTTTTGGGCTCATGAAAAACAGTAGAGATGGCAGAAGTTATAGCACAAATTTAGCCTTCACTCCTCCCGAGTACTTGAGGACAGGAAGAATCACTCCTGAAAGTGTAATTTACAGTTTTGGAACCTTATTGCTTGATCTTTTAAGTGGAAAGCATATCCCACCAAGTCATGCACTTGACCTTATACGAGGCAAGAATTTTCAAATGTTGATGGACTCATGTTTGGAAGGTCATTTTTCAAATGATGATGGAACTGAAATAGTGAGATTAGCTTCGCGTTGTTTACAATATGAACCTCGTGAGAGACCAAATGCCAAGTCGCTTGTCACTGCTCTGGCTCCTCTTCAGAAAGAAACTTCAGTACTGTCATATGCTTTAATGGGACTACCTGATAGGAGTCTATCTTCAAAAGAAGCAGTTTTATTAACACCTTTTGGTGATGCTTGTTCAAGAAGAGATCTGACTGCAATACATGAAATTTTGGAAAAGGTGGGCTACAAGGACGATGAACATGTTGCGAATGAGCTTTCCTTTCAAATGTGGACAAATCAAATACAAGATACACTAAATTTCAAGAAGCGCGGGGATTCTGCTTTTCACGCTAGAGACTTCTCTACCGCCATTGACTGCTATACTCAATTCATTGATGGGGGGACCATGGTATCGCCAACTGTGTACGCTAGGCGTTGCCTATGCTACATGATGAATGACATGGTACAAGAAGCACTTGGAGACGCCATGCAAGCTCAATCGATATCTCCTACTTGGCCTACTGCATTCTACCTTCAAGCAGTTGCGCTCTCCAGCCTTGGCATGGACAATGATGCACAAGAAAGTCTCAAAGACGGCACAACACTGGAAACTAGAAACCATAGAAATTGA 1482 0.4082 MGVRCSKLSLCWWPSHIKSNHQNFSDNNDDDGNKKQKDTGVGFTEYSLDQLRVATEGFSSDNIVSEHGEKAPNVVYRGCLEDDRLVAVKRFNKSAWPDSRQFLEEARAVGELRSERLANLVGCCCDGEERLLVAEFLPNETLSKHLFHWDVQPMKWAMRLRVALYLAQALEYCNSKGRALYHDLNAYRILFDQEGNPRLSCFGLMKNSRDGRSYSTNLAFTPPEYLRTGRITPESVIYSFGTLLLDLLSGKHIPPSHALDLIRGKNFQMLMDSCLEGHFSNDDGTEIVRLASRCLQYEPRERPNAKSLVTALAPLQKETSVLSYALMGLPDRSLSSKEAVLLTPFGDACSRRDLTAIHEILEKVGYKDDEHVANELSFQMWTNQIQDTLNFKKRGDSAFHARDFSTAIDCYTQFIDGGTMVSPTVYARRCLCYMMNDMVQEALGDAMQAQSISPTWPTAFYLQAVALSSLGMDNDAQESLKDGTTLETRNHRN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02167 493 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 1 493 - -
Tsu02g02167 493 SUPERFAMILY Protein kinase-like (PK-like) 41 316 IPR011009 -
Tsu02g02167 493 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 493 IPR045845 GO:0004672|GO:0009742
Tsu02g02167 493 ProSiteProfiles Protein kinase domain profile. 61 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02167 493 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Tsu02g02167 493 Pfam Protein tyrosine and serine/threonine kinase 75 312 IPR001245 GO:0004672|GO:0006468
Tsu02g02167 493 Gene3D Tetratricopeptide repeat domain 386 493 IPR011990 GO:0005515
Tsu02g02167 493 Gene3D Phosphorylase Kinase; domain 1 31 136 - -
Tsu02g02167 493 SUPERFAMILY TPR-like 386 487 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02167 Tsu-Chr2 21287546 21291243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02167 20 313 Glycoside Hydrolase AT3G07070 33.851 4.67e-42 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Tsu02g02167 PK_Tyr_Ser-Thr 1.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02167 - - gmx:732542 889.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02167 02 21287546 21291243 Tsu02g02167 02 21287546 21291243 ECH