Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02146 ATGAAGCAAATGGAACACGAAAAAGCCGCGATCTTGAAAGCAATATCAGTAGACGAAATTGAGATACCAATTGTCTCAGAAAGACTTGATCTAATTCCAATGACAATGATGTCGTCTGGCAACAATTCTGTTTGTCGGTTTTCCAGAAAGGAGAAAAATGTTTGTGCATCGAATGAATCGGCGAAGAAACTTTCTTTGCTTATAGTTTTCTATGCTATTGTTATGGTTGTTGAACTTATTGGGGGTTTGAAAGCTCACAGCTTATCTGTTATCAGTGATGCGGCGCATTTGCTTTCTGATATAGCCGGATTCGCCATCTCTCTCTTTGCAGTGTGGGCTTCAGGTTGGGAAGCAACACCTCATCAATCCTTTGGATACAATCGTCTCGAGGTTTTGGGCGCTCTTTTATCTGTTCAGTTAATTTGGTTCATATCTggttttttaatatatgaagCAGTTGGTAGACTTGTTTATAGAAATGCTAGTGTGAATGGAAAACTCATGTTTGCAATTGCAACATTTGGATTTGTTCTTAATTGTATCATGGTTATATGGCTTGGTCATGATCATAGTCATCATCATGGATTTGGAGACTCAGATCACGACCATGATCATCATGTTCATGATCATGGTCATAGCCATCACCATGGTCAtgatcataatcatcatcaatgcGGTGAAGACTCAGGTCATGACCATGCGATGGATGAACTACCTAAAATAATTGATGAGGAGAATCTTACAATACTATCAAATGGTAAGAGGAATATGAATGTATTGAACATTAATATTCAAGGAGCCTATTTGCATGTCATGACTGATATGATTCAATCTATCGGAGTAATGATTGCTGGAGGCATAATATGGGCGAAACCAGAATGGTTTATGGTTGATCTTTTATGTACTCTCATATTTTCTGTTTTATCCTTAAGTACTACTCTACCAATGCTTAGGAACATTTTTGGCATTCTGATGGAGAGAACACCTAGTGAAGTTAATATCATTCAGCTGGAAAATGGTCTTAGAAGCATCAAGGGTGTGCAGGAGGTTCATGACTTGCACGTTTGGGCTATAACAGttggaaaattgtttttatcatgTCATGTAGTGGCTGAACCTGGGATCAGTTCCATTCATTTACTTCATAAGATTAAACATTATTGTGAAAACACTTATCAAATACAACATGTAACCATACAAATTGAGTAA 1209 0.3606 MKQMEHEKAAILKAISVDEIEIPIVSERLDLIPMTMMSSGNNSVCRFSRKEKNVCASNESAKKLSLLIVFYAIVMVVELIGGLKAHSLSVISDAAHLLSDIAGFAISLFAVWASGWEATPHQSFGYNRLEVLGALLSVQLIWFISGFLIYEAVGRLVYRNASVNGKLMFAIATFGFVLNCIMVIWLGHDHSHHHGFGDSDHDHDHHVHDHGHSHHHGHDHNHHQCGEDSGHDHAMDELPKIIDEENLTILSNGKRNMNVLNINIQGAYLHVMTDMIQSIGVMIAGGIIWAKPEWFMVDLLCTLIFSVLSLSTTLPMLRNIFGILMERTPSEVNIIQLENGLRSIKGVQEVHDLHVWAITVGKLFLSCHVVAEPGISSIHLLHKIKHYCENTYQIQHVTIQIE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02146 402 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 4 402 - -
Tsu02g02146 402 Gene3D Cation efflux protein transmembrane domain 60 324 IPR027469 -
Tsu02g02146 402 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 333 402 IPR036837 -
Tsu02g02146 402 SUPERFAMILY Cation efflux protein transmembrane domain-like 62 326 IPR027469 -
Tsu02g02146 402 TIGRFAM CDF: cation diffusion facilitator family transporter 62 402 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu02g02146 402 Pfam Cation efflux family 66 325 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
Tsu02g02146 402 MobiDBLite consensus disorder prediction 201 230 - -
Tsu02g02146 402 PANTHER METAL TOLERANCE PROTEIN B 4 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02146 Tsu-Chr2 21100642 21102373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02146 45 402 Inorganic Solute Cotransporters AT3G58810 48.077 4.19e-101 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02146 K14689 - gmx:100789520 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02146 02 21100642 21102373 Tsu02g02146 02 21100642 21102373 ECH