Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02114 ATGTTATCTACCGACACACTTGTTGAGAATTTTCCTGGTTCTGTCAATGGATGCATATTTGGAAACATTcctgtttctgttttttcaaATCAGAATCCAGAAAATGGTTTCAAATTTGtagattcaaattcaatatcCCCTTCAAGTCATTCAGATTCTACAAATGATTCTGTTACAACCTCAAATGTTGAATCTTCTGAGAGTAGTAAATATTCAAATCCTATTCTTAGGTTTATAAGTGATATTCTTATGGATGAAGAAGATTATTTGGAGAAAAAACCTTGTATGTTACAAGATTGTTTGAAACTTCAAGCTGCTGAAAAATCATTTTATGATGTTTTAGGTAATAATGATTTTGATGCAAGAACAGTAACTAGTACTAGTTCTGAGAGCTATAGTAATTGTAGTTATACAACTGATAATTCTGATTCACCTGAAAATAATGCCTATGaggtgtttgataaaatgcctcATGAAGGTGTTTTCAATTTTCCAAGTGATGCTTGGAAGATGAATCAAGAGGGTACTTTGATTTTTGGTTCTAGAGGAGGATCAAGGGAAAAGAGAGGTCTTTTGATGAATGATGTTGGTATCTTACATGAAGAGGATCTTAGAAGTAGCAAGGTGAAAGCTGTTTATTATGATGATTCAGAGTTATCAGAGATGTTTGATGAGGTACTTCTTTGTAAGGATGGTAAAAGTCCGTCCATTTTTTGTGCTAATTCTGAACCATCATTGCTTTCACATGTTTCTAGTTCATTAGGATCTAATGGAAAAACATCGCGTTCTAAGAAAGGTTCAAACAAGGTTAAAAGACTAAGTTCTACCGTAGATTTATGGACTTTGTTAACTCAATGTGCACAAGCTGTTGGTAGCTATGATCAAAGGAATGCAAATGATATACTCAAGCAGATTAGGCAGCACTCTTCATCGTGTGGTGATGGACTCCAGCGTTTAGCTCATTACTTTGCTGATGGCCTTGAGGCGCGGTTATCTGCTGGGACGCCGATGTATAAACAACTGCAGTCAACATCTTCTGCAGATATGTTAAAAGCTTATAAGGTTTACATCACAGCGTCTCCATTTCAACGGATGTCAAATTTCTTGGCAAACAGAACTATTCTTAGGTTGGCACAAAACAAAAGCAGCCTCCATATTATTGACTTTGGTATTTTCTATGGCTTTCAGTGGCCTTGCCTCATTCAGCGTCTTTCGGAAATGCCTGAGGGTCCACCGAGGCTTCGTATTACAGGCATTGATCTTCCTCAGCCAGGATTTAGGCCTGCAGAAAGAGTTGAAGATACAGGTCGGCGACTTGAGAAGTACTGCAAGAGGTTTGGAGTTCCTTTTGAGTACAATTGTCTTGCACAGAAATGGGACACTATAAGACTTGAGGATCTCAAGATTGATAGAGAAGAAGTAACAGTGGTTAACTGTTTATACAGATTGAAGAACCTCTCCGATGAAACAGTGACAGCAAATTGTCCAAGAGATGCTGTGTTAAGGTTGATAAGGAGGATTAATCCAAACATCTTCATACATGGAGTAGTGAATGGAACGTATAATGCGCCATTTTTTCTTACTAGGTTCAGAGAAGCAATGTTTCATTTCTCATCATTGTTTGATATGCTTGAAGCTACTGTGCCGCGTGAAGATCCATATAGGTTGATGTTTGAGAAAGGGTTATTTGGAAGGGATGCAGTGAATGTGATAGCTTGTGAGGGAGCAGAGAGAGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAACAAGAGAGCAAGGTTCAAGCAACTTCCATTGGCTCCAGAATTGGTGGATAGGGTGAAAGAAATGGTGAAGAAGGAATATCCTAAAGATTTTGTAGTTGATGAGGATGGGAAATGGGTTCTGCAGGGTTGGAAAGGACGTATTCTGCATGCTGTTTCTTGTTGGGTTCCTGCTTAA 1950 0.3754 MLSTDTLVENFPGSVNGCIFGNIPVSVFSNQNPENGFKFVDSNSISPSSHSDSTNDSVTTSNVESSESSKYSNPILRFISDILMDEEDYLEKKPCMLQDCLKLQAAEKSFYDVLGNNDFDARTVTSTSSESYSNCSYTTDNSDSPENNAYEVFDKMPHEGVFNFPSDAWKMNQEGTLIFGSRGGSREKRGLLMNDVGILHEEDLRSSKVKAVYYDDSELSEMFDEVLLCKDGKSPSIFCANSEPSLLSHVSSSLGSNGKTSRSKKGSNKVKRLSSTVDLWTLLTQCAQAVGSYDQRNANDILKQIRQHSSSCGDGLQRLAHYFADGLEARLSAGTPMYKQLQSTSSADMLKAYKVYITASPFQRMSNFLANRTILRLAQNKSSLHIIDFGIFYGFQWPCLIQRLSEMPEGPPRLRITGIDLPQPGFRPAERVEDTGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPNIFIHGVVNGTYNAPFFLTRFREAMFHFSSLFDMLEATVPREDPYRLMFEKGLFGRDAVNVIACEGAERVERPETYKQWQVRNKRARFKQLPLAPELVDRVKEMVKKEYPKDFVVDEDGKWVLQGWKGRILHAVSCWVPA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02114 649 Pfam GRAS domain family 281 646 IPR005202 -
Tsu02g02114 649 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 155 648 - -
Tsu02g02114 649 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 29 125 - -
Tsu02g02114 649 MobiDBLite consensus disorder prediction 39 68 - -
Tsu02g02114 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 155 648 IPR005202 -
Tsu02g02114 649 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 29 125 IPR005202 -
Tsu02g02114 649 ProSiteProfiles GRAS family profile. 270 647 IPR005202 -
Tsu02g02114 649 MobiDBLite consensus disorder prediction 250 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02114 Tsu-Chr2 20748249 20750640 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02114 10 648 GRAS Transcription Factor Family AT2G29060 42.711 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g02114 GRAS 4.7e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02114 - - lja:Lj3g3v3213190.1 904.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02114 02 20748249 20750640 Tsu02g02114 02 20748249 20750640 ECH
Tsu02g05211 02 61058658 61061024 Tsu02g02114 02 20748249 20750640 PCT