Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02112 ATGGATCCTCGTTTCAACTCCAATTACACCAACGGtttcaaatcaaaccaaattcCCAATACACTCGCTGTAGAAGATCAAACCTTTGGATTCATAGATAACCCTTTTCTTCATCCACCACATGATCCAAACAATGCTTCAATTTCCATTTCCACCATCACAGAAGAAGATTCTCCTTTGGATGAAACTGATTTCTCTGCAACTGTTCTTCGTTACATAAACCAAATGCTTATGGAAGAAGACATGGAGAAAAAACCATGTATGTTTCATGATTCATTAGCTTTACAAGCTGCTGAGAAATCATTCTATGAAGTTATTGGTCAGACATACCCTTCTGTTAGTTCTATTCAAAATCATCACAATGTAGATAGTCCTGATAGTCTTGGTAGTAATTTTAGTAGTTATAGCAATTGTGGTACCACTACTAGTAGTAGTAATTCTGTCGAGTTTGAGTCTTATTGGAGTAATTTTGATGTTTCTGAGTATAAGCCTTCTATATTGCAAACCGTGTTTCCTACTGATTTTGTTTTTCAGGCTAGTTCAATGAATGGTTATGGTGGTACTACTACTAGCAGTAGTAATTTCGGTGTGACGAATGGTGGATTTTTGGTTAGTTCTAGGGATGGATTTCCTGATTCGAACTTGTTTAGTAAGAATGAGTCGGTACTGCAATTTGAGAGAGGTGTGGAGGAAGCTAATAAGTTTCTGCCAAAAGTGAATCCCTTGGTTATTGACCTGGAGAATAACCACCCTTTTATCCCTTCTTTTAGGAAGGTTCCACAGGAGATAGTGGTTAAGACGGAGAGTAGTGAAAGAGAGCATTTTTCTGTTGAGTCGAGGGGGAGGAAGAATCACGAACGGGGAGATGAAACGGATTTACAGGATGAGAGAAGCAACAAGCAGTCGGCTGTTTACACTGATGATAGTGAGCTATCGGAGCTGTTTGATAAGGTGTTGCTTGGCACAGGGTGCAGAAAGGAGGGAAATCCTAAGGAAGAGAAGCCTAATGAACAAGTTACGGGTGTGCAGCAGAAAGAAGAAGCGAACAATTCTGGGGGTGGCAAGGGTCGTGGTAAGAAACAAGGCAACAAGAAGGGTGTTGTGGATTTGAGGACAATGTTGATTCTGTGTGCACAATCTGTTTCTTCTGATGATCATGCAACTGCTAAGGAGTTGTTAAAGCAGATAAGGCAACATTCTTCTCCACTTGGTGATGGATCTCAGAGGCTGGCACATTGCTTTGCAAATGCCCTTGAAGCGCGTTTGGCTGGCACTGGTACTCAGATTTATACTGCTTTATACTCCAAAAGGAACTCTGCTGCTGACATGGTGAAAGCTTATCAAATGTATATTTCAGCTTGTCCGTTCAAGAAGCTTGCTATCATTTTTGCAAACCATACAATTTTGAATCTAGCCAAGGAAGTAGAAACTCTTCACATTGTAGATTTTGGCATTCGTTATGGCTTCCAGTGGCCTGCCCTTATTTATCGTCTATCCAAACGACCTGGTGGACCTCCCAAACTGCGCTTGACAGGGATAGAGCTGCCTCAACCTGGCTTCAGGCCTGCTGAGAGAGTCCAGGAGACAGGGCTTCGCCTGGCAAGGTATTGTGAACGTTTTAATGTTCCATTTGAGTTTAATGCTATTGCACAGAAATGGGAAACCGTCAAAGTTGAGGACTTGAAGATACAGAAAAATGAACTTCTTGTGGTGAATTGTATATGTCGATTTAAAAATCTACTTGATGAGACAGTAGTATTGAATAGTCCCAGGGATGctgttttaaaattaattaagaatgCAAATCCCAATATCTTTATACATACTACTGTCAATGGGAGCTATAATGCCCCATTCTTTGTGACACGGTTCAAGGAGGCTCTTTTCCATTACTCTACAATGTTTGATGTGCTTGACGTCAATGTTGCTCGTGAAGATCCAATGAGGTTGATGTTTGAGAAAGAGTTCTGGGGGCGGGAGGTAATAAACACTATAGCTTGTGAGGGTTCTGAGAGGGTTGAGAGGCCAGAGACATACAAGCAATGGCAGGTTCGGAACATAAGGGCTGGATTTAGGCAACTGCCCTTGGATAAACATCTCATTAACAAGTTAAGATGCAAGTTGAAAGATGTGTATCATAGTGATTTCATGCTTGTTGAAGATGGCAACTGCATGCTGCAAGAATTTATATCACCAACTCTATATTACTGGCCTGATATTCATTTTGCAACTAGTGGTATTGAAGAGTTGCAGACAACAATTTCTTTAGAGAGCCCTTATCTTGAATCAAGCAACAACTCAGaaacaaaaaagatgGATCCAAATTTTCCTCAATCTTTCACAAACGGTTACTACCACTTTgatgaagaaggaagcataGTGGTTTCTGGGTCTGATCCAAATCAATATGATAGTTTCCTTGATGCTGATCCAAATCAGTATGATAACTTCCTTGATGCTGATCCAAATCAGTATGATAGTTTCCTTGATGCTGATCCAAATCAATATGATAACTTCCTTAATGCTGATCCAAATCAATATGATAGCTTCCTTGATGCTGATACACTTGGTTTTGCAGCCACCACCTTCCCTATAGAAGGTTCTATGGGCTTGGTGACAGATCCTTCACTGGAAGATGCTGATTTTTCAGATACTGGAAAGTTCATAAACCAAATCCTGATGGAAGAAAACGTTGACCAGAGACCATTTTATGATCCGCTTAGCTTGCAAACCACAGAAAAATCATTTTATGATGCTCTCTTACACCAAAACAAACCTCCTTCACCTAATCAACATCCCTTAGATATTCATCACTCTGATGGAACAAACAGCACCAGTAGTAACAacaatagtaatagtaatagtagCAGCGATGATTCTCGAGATATGATACCCCTTTCCCCTGATACTGCTGTTTCTGATCTTGGTGATCATGTTTTTCAGTTTAATTCCCCTGCCATTTCTCACACTTTCTCTCAACCTCATTCTACTAGTGATGCACTCAGAGATTTGGATTCTTCTATTACAAAGATGGCACAAAACATTTTCAGTGATGTAGATTCTGTTTCCTTATTCAAGAAAAGTTTAGAAGAAGCCAACAAGTTACTTCCTCCGCAGGCTCAACTCTTGACTGGTTTTGAATCATCCAATTTCAATGTGGCTGAGGAGAAAGAGAATCTGTTTGTGTTGAAGGGTAGAAAGAATCACAAGCGAGAAGAAAGTTATAGTAAcgaagaagacgaagaagcTGGTAGGAGAAGTAGCAAACAATCAGCTATTAGCGTTGTTGACGAGGATGAATTATCCGAGATGTTTGATAAAGTTTTGCTTAATGTTGAACATTTGCCACTATGCAATGAAAATGATAGCTCACAGACTGGACAAGTGAAAACGGAGCAGTCACCTCCATCTAATGGAGGGAAGGCCCGTCCTAAGAAACAAGGCAAAAAGAAAGATACAATTGATTTGAGGAATCTTCTGCTTCTGTGCTCACAATCTGTGTATGCCAATGACAACAGGAATGCTAATGAACTACTGAAGCAGATTAGGCAACATTCTTCATCCATTGGAGATGCACCACAAAGGCTAGCTCATTACTTTGCCAATGGCCTTGAGGCACGCCTTGTCGGTAATGGTACTAATGCACAAGTGTTCTATTCTTCGCCGAGTTCCAAGAGGATCAGTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTAGTAGCCCATTCAAAAAGTTTGCATTCTTTTATGCAAATAAAATGATTATGCAAGCTGCTGCAAATGCTGAAACCCTTCATATCATTGATTTTGGTATCCTATACGGTTTTCAGTGGCCAATACTTATTAAGTTTTTGTCAGATAGAGATGTTGGACCTCCAAAGCTAAGGATCACTGGGATAGAGTTCCCTTTACCTGGCTTTCGTCCAATGGAAAAAATTGAGGAAACTGGTCGTCGTCTTTCTAACTATTGCAAGCGTTTCAATGTTCCCTTTGAGTTTAATGCCATAGCATCACGGAATTGGGAAACAATTCGAGTTGAAGATCTTAAAATTGGGAGCAATGAGGTAGTTGTTGTGAACACTTTGATGAGGTTTAAGAATTTACTGGATGAAAGTATTGAAGTGAACAGTCCAAGAAACGCGGTTCTGCAATTGATCAGGAAGATAAACCCTGCTATTTTTACTCAGTCCATTATTAATGGATCATATAATTCGCCTTTCTTTGCTACACGGTTTAGGGAGGCACTGTTTCATTTTTCTGCtctttttgatatgtttgacACTGTCATACCGCGCGGAAACGAACATAGGATGATGATGGAGAAGGAAAGTCTGGGTAGGGAGGCTATGAATGTTGTAGCATGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATACAAACAATGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAGCTTCCCTTGAAGTCAGAATTAATGGACAAGTTTAGGGCAAAATTAAGTAAGTACCATAAagattttgtatttgatgaagaCAACAATTGGATGCTTCAAGGTTGGAAAGGTCGCATTTTATATGCTTCAACATGTTGGGTGCCAGCATAA 4599 0.3912 MDPRFNSNYTNGFKSNQIPNTLAVEDQTFGFIDNPFLHPPHDPNNASISISTITEEDSPLDETDFSATVLRYINQMLMEEDMEKKPCMFHDSLALQAAEKSFYEVIGQTYPSVSSIQNHHNVDSPDSLGSNFSSYSNCGTTTSSSNSVEFESYWSNFDVSEYKPSILQTVFPTDFVFQASSMNGYGGTTTSSSNFGVTNGGFLVSSRDGFPDSNLFSKNESVLQFERGVEEANKFLPKVNPLVIDLENNHPFIPSFRKVPQEIVVKTESSEREHFSVESRGRKNHERGDETDLQDERSNKQSAVYTDDSELSELFDKVLLGTGCRKEGNPKEEKPNEQVTGVQQKEEANNSGGGKGRGKKQGNKKGVVDLRTMLILCAQSVSSDDHATAKELLKQIRQHSSPLGDGSQRLAHCFANALEARLAGTGTQIYTALYSKRNSAADMVKAYQMYISACPFKKLAIIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETVKVEDLKIQKNELLVVNCICRFKNLLDETVVLNSPRDAVLKLIKNANPNIFIHTTVNGSYNAPFFVTRFKEALFHYSTMFDVLDVNVAREDPMRLMFEKEFWGREVINTIACEGSERVERPETYKQWQVRNIRAGFRQLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQEFISPTLYYWPDIHFATSGIEELQTTISLESPYLESSNNSETKKMDPNFPQSFTNGYYHFDEEGSIVVSGSDPNQYDSFLDADPNQYDNFLDADPNQYDSFLDADPNQYDNFLNADPNQYDSFLDADTLGFAATTFPIEGSMGLVTDPSLEDADFSDTGKFINQILMEENVDQRPFYDPLSLQTTEKSFYDALLHQNKPPSPNQHPLDIHHSDGTNSTSSNNNSNSNSSSDDSRDMIPLSPDTAVSDLGDHVFQFNSPAISHTFSQPHSTSDALRDLDSSITKMAQNIFSDVDSVSLFKKSLEEANKLLPPQAQLLTGFESSNFNVAEEKENLFVLKGRKNHKREESYSNEEDEEAGRRSSKQSAISVVDEDELSEMFDKVLLNVEHLPLCNENDSSQTGQVKTEQSPPSNGGKARPKKQGKKKDTIDLRNLLLLCSQSVYANDNRNANELLKQIRQHSSSIGDAPQRLAHYFANGLEARLVGNGTNAQVFYSSPSSKRISTAEFLKAYQVHLSSSPFKKFAFFYANKMIMQAAANAETLHIIDFGILYGFQWPILIKFLSDRDVGPPKLRITGIEFPLPGFRPMEKIEETGRRLSNYCKRFNVPFEFNAIASRNWETIRVEDLKIGSNEVVVVNTLMRFKNLLDESIEVNSPRNAVLQLIRKINPAIFTQSIINGSYNSPFFATRFREALFHFSALFDMFDTVIPRGNEHRMMMEKESLGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLKSELMDKFRAKLSKYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 267 309 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 326 340 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 325 363 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 1069 1095 - -
Tsu02g02112 1532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 872 1531 IPR005202 -
Tsu02g02112 1532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 729 IPR005202 -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 1119 1151 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 267 303 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 1069 1087 - -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 921 963 - -
Tsu02g02112 1532 ProSiteProfiles GRAS family profile. 1147 1530 IPR005202 -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 921 970 - -
Tsu02g02112 1532 ProSiteProfiles GRAS family profile. 361 749 IPR005202 -
Tsu02g02112 1532 Pfam GRAS domain family 370 727 IPR005202 -
Tsu02g02112 1532 Pfam GRAS domain family 1156 1529 IPR005202 -
Tsu02g02112 1532 MobiDBLite consensus disorder prediction 1119 1140 - -
Tsu02g02112 1532 PANTHER SCARECROW-LIKE PROTEIN 14 872 1531 - -
Tsu02g02112 1532 PANTHER SCARECROW-LIKE PROTEIN 14 36 729 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02112 Tsu-Chr2 20735096 20741560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02112 69 735 GRAS Transcription Factor Family AT1G07530 55.072 0.0 726
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu02g02112 GRAS 1.5e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02112 - - rcn:112163987 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02112 02 20735096 20741560 Tsu02g02112 02 20735096 20741560 ECH
Tsu02g05209 02 61051701 61054313 Tsu02g02112 02 20735096 20741560 ECH
Tsu02g05209 02 61051701 61054313 Tsu02g02112 02 20735096 20741560 PCT