Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02099 ATGAAGTGCTTCCATTTCTCAAACGGAGGATCAGAAAAACAACGAGTAATAGGAGAAGACGAAGAATCCTCAGCAGCATCAAGTTCAAGAGGTTCACGTGTTTCATGGGCGCGTTCCTTAAGCTTAATGGACACGCGCCGTTCCGAATACGATTCCGATTCACGTGACTTCTCCGATGCTCTTGGTTTCCATGAGTTTCTCTCTCAACGTCGAGCTAATCATCTTAACATCTTCTCCTTCTCTGACCTTAAAATCGCAACTCGTGGATTCAATAGAGCTCTTTTAATCGGTGAAGGTGGTTTTGGTTCTGTTTATAGAGGAACCCTAAATCATCACTCTCGTCACCATTCTCAAATTGATGTTGCGATTAAACAGTTGAATCGCAATGGTCATCAGGCAtgtttaattttagaaaaaGGGCATAAGGAGTGGATTAATGAAGTGAATTTGTTAGGGGTAATTAAGCATCCAAATCTGGTGAGATTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAGAGGCTTTTGGTTTATGAGTTTATGTCTAATAAGAGTTTGGAAGATCATCTTTTGGTTCGTGTTCCTTCGTCGGTTCTTCCTTGGATTACTAGGTTAAGAATTGCTCAAGATGCAGCTCGTGGGTTGGCTTACCTTCATGAAGAAATGGATTTTCAGCTAATATTTCGCGATTTTAAAACATCCAACATCTTGCTGGATGAGGACTTCAATGCAAAACTTTCTGATTTTGGACTCGCTAGGCAAGGACCCTCAGAAGGGTTCGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGATATGCTGCACCAGAATATGTTCATACCGGTAAGCTGACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTATGAGCTTATCACTGGGAGAAGAGCCGTAGAAAGAAACCTACCAAGAAACGAACAAAAGCTTCTGGATTGGGTAAGACCTTATGTATCTGATTCTAAGAAGTTCCATCATATTGTTGATCCTCGACTTGAGGGACAGAGTTGCACCAAATCAGCTCATAAACTTGCAAATCTAGCAAACAAGTGTCTGATGAAGCAACCAAAATCTCGTCCAAAAATGAGCGAGGTGGTTGAGATTCTCGACAGCATTATCAACGAGACTGTTCCTGTAGATGAATGCGTTTCTGAAGTTGTTACTGAAACAGGGGAAGGAAATGAAGTTAATTTATCTGTAGAGGTCACTGAACCTGAACCAGCTAAACAGGGGAATAATTATCTGAAGAAGGTTTTTGAATTCAGAGACAAGGTGAGCTTAAGAAATAAATCCATTGGAAGGTTTGATTGGAAAAATTGGGCGCCTGGGCTTGTAAGAACTTGGTGA 1377 0.411 MKCFHFSNGGSEKQRVIGEDEESSAASSSRGSRVSWARSLSLMDTRRSEYDSDSRDFSDALGFHEFLSQRRANHLNIFSFSDLKIATRGFNRALLIGEGGFGSVYRGTLNHHSRHHSQIDVAIKQLNRNGHQACLILEKGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMSNKSLEDHLLVRVPSSVLPWITRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGFGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRNEQKLLDWVRPYVSDSKKFHHIVDPRLEGQSCTKSAHKLANLANKCLMKQPKSRPKMSEVVEILDSIINETVPVDECVSEVVTETGEGNEVNLSVEVTEPEPAKQGNNYLKKVFEFRDKVSLRNKSIGRFDWKNWAPGLVRTW 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02099 458 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 41 397 - -
Tsu02g02099 458 Gene3D Transferase(Phosphotransferase) domain 1 183 397 - -
Tsu02g02099 458 MobiDBLite consensus disorder prediction 1 32 - -
Tsu02g02099 458 CDD STKc_IRAK 96 382 - -
Tsu02g02099 458 Pfam Protein tyrosine and serine/threonine kinase 96 379 IPR001245 GO:0004672|GO:0006468
Tsu02g02099 458 SUPERFAMILY Protein kinase-like (PK-like) 72 379 IPR011009 -
Tsu02g02099 458 ProSitePatterns Protein kinases ATP-binding region signature. 96 124 IPR017441 GO:0005524
Tsu02g02099 458 Gene3D Phosphorylase Kinase; domain 1 68 182 - -
Tsu02g02099 458 PANTHER OS01G0588500 PROTEIN-RELATED 41 397 - -
Tsu02g02099 458 ProSiteProfiles Protein kinase domain profile. 90 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02099 Tsu-Chr2 20581634 20584112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02099 78 379 Glycoside Hydrolase AT3G07070 50.165 2.40e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu02g02099 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02099 - - gmx:100811825 698.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02099 02 20581634 20584112 Tsu02g02099 02 20581634 20584112 ECH