Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu02g02098 | ATGGACAAAAGCATGATTGCTGATATGGAATCTCTTCCGGAAGCAGATAAACAAAGAATGGCTACTATGATCGATCAGCTCCAGATCCGTGACAgCTTGAGAATGTATAATAACTTGGTGGAGAGATGCTTTCATGATTGCGTTGATACGTTTAAGCATAAATCCCTGCAAAAGCAAGAGGAAACTTGTGTTCGAAGATGTGCAGAGAAATTTTTGAAGCATTCTATGCGTGTCGGCATGAGGTCTCCATCTGAGTGTTCATTAGCTTCGATTGGGCTAGCAAAGCGGTTTGCGTATCTAGCTCAATCATGTCTGGCTTTGTGGCCAAGTCTCGGGAACTCGGCATCACCTTGCTCAAAATTGGTTATCTCCGACCATAGTTTCAATGCCCAAATTTGGACACTTTACATCAAAGtgcttcatagatCTTTGCTACTGTGGGCCATCACCATATTAGTTCACTACATATCAACAGCCTTCTTCACCTCTCTTCattccttatttttttcttctctatatTCTCCCTTGACTTCAATACAAACAGGCAACAAGGTTATGGGAATTAGTATTGTTTCTGCCATGGGAGTTTGTTTGCGCAACCACATCAAGGCTGAGAGCCCAATCAATTCTGTTTCAGGGTTAAGTTCAAAGAGTGTGAATGCAAGTGCAGAAAATATCAGTAGCCCAGGTTGTAAGGTTCCTGATGATCTCAGTAGCTCAAGTAAGACCGGAGTACCAGCGGAATCGGTATTGGTCCCTCGGACTGCTCATGGTGTGGAGGAGATCTTGCAACCATCCAATTTGAAGTGCTTTACTTCTACAGAACTTCAGGCTACAACCAGAAATTTTCATGTAGACAGTGTGTTAGGAGATGATGGTATTGGATCAGTTTTTAAGGGTTGGATTGATGAAAACTCAACTTCTGCTGCCAAACCTGGCAAAGGCATTGCTGTTGCTGTCAAAAGACTTTATCAGGATGGCTTCAAACGTCACAAGGATTTGTTGGCTGAAGCCAACTATCTAGGCCAGCTTTCACATCCTCATTTAGTGAAATTGATTGGATATTGCCTTGAAGATGAAAACAGCTTTATGGTCTATGAACTTATGCCTCGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGCTCATATTTTCAACCTCTTTCTTGGAACCTCCGTTTAAAGGTTGCTTTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGGTGAAACAAAAGCGACATACTGCGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCTGGCAAAGGGCGGGGGGACTGCGGTTGATAAAAACAGGCTAACCTACGGATATACAGCTCCAGAATACTTAGCCACTGGTAATCATAGTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTGTTGGATAATCGTCTTGAAGGCCAATACGAATTAGAAGATGTTTATAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAAGATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCCTGATGTAAATGGATGCAATCAGAATCGTTTACGTAGAAGAAGTGCTGATGATGTTCCCCGTGTTAGAACAGCCGCGGCATATCCCCTACGGTCTACTTCTACATGA | 1803 | 0.4171 | MDKSMIADMESLPEADKQRMATMIDQLQIRDSLRMYNNLVERCFHDCVDTFKHKSLQKQEETCVRRCAEKFLKHSMRVGMRSPSECSLASIGLAKRFAYLAQSCLALWPSLGNSASPCSKLVISDHSFNAQIWTLYIKVLHRSLLLWAITILVHYISTAFFTSLHSLFFSSLYSPLTSIQTGNKVMGISIVSAMGVCLRNHIKAESPINSVSGLSSKSVNASAENISSPGCKVPDDLSSSSKTGVPAESVLVPRTAHGVEEILQPSNLKCFTSTELQATTRNFHVDSVLGDDGIGSVFKGWIDENSTSAAKPGKGIAVAVKRLYQDGFKRHKDLLAEANYLGQLSHPHLVKLIGYCLEDENSFMVYELMPRGSLENHLFIRGSYFQPLSWNLRLKVAFGAAKGLAFLHSGETKATYCDFKTSNVLLDSNYNAKLSNFGLAKGGGTAVDKNRLTYGYTAPEYLATGNHSAKSDVYSFGVVLLEILSGRRVVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVYKVAILSLRCLSIEAKLRPKMDEVVTNLEQLQVPDVNGCNQNRLRRRSADDVPRVRTAAAYPLRSTST | 600 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu02g02098 | 600 | SUPERFAMILY | Tim10-like | 28 | 82 | IPR035427 | - | |
Tsu02g02098 | 600 | PANTHER | OS01G0588500 PROTEIN-RELATED | 235 | 582 | - | - | |
Tsu02g02098 | 600 | ProSiteProfiles | Protein kinase domain profile. | 283 | 563 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu02g02098 | 600 | Pfam | Protein tyrosine and serine/threonine kinase | 285 | 560 | IPR001245 | GO:0004672|GO:0006468 | |
Tsu02g02098 | 600 | Gene3D | Phosphorylase Kinase; domain 1 | 255 | 368 | - | - | |
Tsu02g02098 | 600 | Gene3D | Mitochondrial import inner membrane translocase subunit tim13 like domains | 7 | 87 | IPR035427 | - | |
Tsu02g02098 | 600 | PANTHER | SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED | 235 | 582 | - | - | |
Tsu02g02098 | 600 | Pfam | Tim10/DDP family zinc finger | 24 | 81 | IPR004217 | - | |
Tsu02g02098 | 600 | SUPERFAMILY | Protein kinase-like (PK-like) | 264 | 566 | IPR011009 | - | |
Tsu02g02098 | 600 | Gene3D | Transferase(Phosphotransferase) domain 1 | 369 | 580 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu02g02098 | Tsu-Chr2 | 20574888 | 20580815 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu02g02098 | 269 | 560 | Glycoside Hydrolase | AT3G07070 | 42.140 | 1.25e-72 | 237 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Tsu02g02098 | PK_Tyr_Ser-Thr | 1.7e-36 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu02g02098 | - | - | mtr:MTR_4g063930 | 617.461 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Tsu02g05198 | 02 | 60940712 | 60944340 | Tsu02g02098 | 02 | 20574888 | 20580815 | PCT |