Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02098 ATGGACAAAAGCATGATTGCTGATATGGAATCTCTTCCGGAAGCAGATAAACAAAGAATGGCTACTATGATCGATCAGCTCCAGATCCGTGACAgCTTGAGAATGTATAATAACTTGGTGGAGAGATGCTTTCATGATTGCGTTGATACGTTTAAGCATAAATCCCTGCAAAAGCAAGAGGAAACTTGTGTTCGAAGATGTGCAGAGAAATTTTTGAAGCATTCTATGCGTGTCGGCATGAGGTCTCCATCTGAGTGTTCATTAGCTTCGATTGGGCTAGCAAAGCGGTTTGCGTATCTAGCTCAATCATGTCTGGCTTTGTGGCCAAGTCTCGGGAACTCGGCATCACCTTGCTCAAAATTGGTTATCTCCGACCATAGTTTCAATGCCCAAATTTGGACACTTTACATCAAAGtgcttcatagatCTTTGCTACTGTGGGCCATCACCATATTAGTTCACTACATATCAACAGCCTTCTTCACCTCTCTTCattccttatttttttcttctctatatTCTCCCTTGACTTCAATACAAACAGGCAACAAGGTTATGGGAATTAGTATTGTTTCTGCCATGGGAGTTTGTTTGCGCAACCACATCAAGGCTGAGAGCCCAATCAATTCTGTTTCAGGGTTAAGTTCAAAGAGTGTGAATGCAAGTGCAGAAAATATCAGTAGCCCAGGTTGTAAGGTTCCTGATGATCTCAGTAGCTCAAGTAAGACCGGAGTACCAGCGGAATCGGTATTGGTCCCTCGGACTGCTCATGGTGTGGAGGAGATCTTGCAACCATCCAATTTGAAGTGCTTTACTTCTACAGAACTTCAGGCTACAACCAGAAATTTTCATGTAGACAGTGTGTTAGGAGATGATGGTATTGGATCAGTTTTTAAGGGTTGGATTGATGAAAACTCAACTTCTGCTGCCAAACCTGGCAAAGGCATTGCTGTTGCTGTCAAAAGACTTTATCAGGATGGCTTCAAACGTCACAAGGATTTGTTGGCTGAAGCCAACTATCTAGGCCAGCTTTCACATCCTCATTTAGTGAAATTGATTGGATATTGCCTTGAAGATGAAAACAGCTTTATGGTCTATGAACTTATGCCTCGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGCTCATATTTTCAACCTCTTTCTTGGAACCTCCGTTTAAAGGTTGCTTTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGGTGAAACAAAAGCGACATACTGCGATTTCAAGACTTCAAATGTCTTGCTAGATTCAAATTATAATGCAAAACTTTCTAATTTTGGGCTGGCAAAGGGCGGGGGGACTGCGGTTGATAAAAACAGGCTAACCTACGGATATACAGCTCCAGAATACTTAGCCACTGGTAATCATAGTGCTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAGCCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTGTTGGATAATCGTCTTGAAGGCCAATACGAATTAGAAGATGTTTATAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAAGATGGATGAGGTTGTTACAAATTTGGAGCAGTTGCAGGTTCCTGATGTAAATGGATGCAATCAGAATCGTTTACGTAGAAGAAGTGCTGATGATGTTCCCCGTGTTAGAACAGCCGCGGCATATCCCCTACGGTCTACTTCTACATGA 1803 0.4171 MDKSMIADMESLPEADKQRMATMIDQLQIRDSLRMYNNLVERCFHDCVDTFKHKSLQKQEETCVRRCAEKFLKHSMRVGMRSPSECSLASIGLAKRFAYLAQSCLALWPSLGNSASPCSKLVISDHSFNAQIWTLYIKVLHRSLLLWAITILVHYISTAFFTSLHSLFFSSLYSPLTSIQTGNKVMGISIVSAMGVCLRNHIKAESPINSVSGLSSKSVNASAENISSPGCKVPDDLSSSSKTGVPAESVLVPRTAHGVEEILQPSNLKCFTSTELQATTRNFHVDSVLGDDGIGSVFKGWIDENSTSAAKPGKGIAVAVKRLYQDGFKRHKDLLAEANYLGQLSHPHLVKLIGYCLEDENSFMVYELMPRGSLENHLFIRGSYFQPLSWNLRLKVAFGAAKGLAFLHSGETKATYCDFKTSNVLLDSNYNAKLSNFGLAKGGGTAVDKNRLTYGYTAPEYLATGNHSAKSDVYSFGVVLLEILSGRRVVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVYKVAILSLRCLSIEAKLRPKMDEVVTNLEQLQVPDVNGCNQNRLRRRSADDVPRVRTAAAYPLRSTST 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02098 600 SUPERFAMILY Tim10-like 28 82 IPR035427 -
Tsu02g02098 600 PANTHER OS01G0588500 PROTEIN-RELATED 235 582 - -
Tsu02g02098 600 ProSiteProfiles Protein kinase domain profile. 283 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g02098 600 Pfam Protein tyrosine and serine/threonine kinase 285 560 IPR001245 GO:0004672|GO:0006468
Tsu02g02098 600 Gene3D Phosphorylase Kinase; domain 1 255 368 - -
Tsu02g02098 600 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 7 87 IPR035427 -
Tsu02g02098 600 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL11-RELATED 235 582 - -
Tsu02g02098 600 Pfam Tim10/DDP family zinc finger 24 81 IPR004217 -
Tsu02g02098 600 SUPERFAMILY Protein kinase-like (PK-like) 264 566 IPR011009 -
Tsu02g02098 600 Gene3D Transferase(Phosphotransferase) domain 1 369 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02098 Tsu-Chr2 20574888 20580815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02098 269 560 Glycoside Hydrolase AT3G07070 42.140 1.25e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu02g02098 PK_Tyr_Ser-Thr 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02098 - - mtr:MTR_4g063930 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05198 02 60940712 60944340 Tsu02g02098 02 20574888 20580815 PCT