Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02097 ATGGGTAACGGAATAGGAAAATTAACGGTGTGTTTCACTGGAAAAAACGGTAGTAACAGAAAACAcgatatatcaattttaataacgGATCCTTTAGATGAAGGCCTTGGTCACTCTTTCTGTTATGTTAGACCCGACCCGACCCGTTTATCTAGTTCTAAAGTTCATTCTGAAGAAACAACAACTTTCAGAACTATCTCTGGTGCTTCTGTTAGCGCTAACACGTCGACGCCGTTATCAACGGCGTTTATGGATTTATACTCTTACGGTTGTTTTGATAGAGCTGCTGCGTTTGAAAGTTCAACTTCTTTTGCTTCTCTTCCTTTACAACCGATTCCGAAGAATCTTATAAGTTCCGGTTCGGGTCCTTTTTCGGGTAATTTCGGTGGTGGTGTTGGTGCTTTTCCGAGTTCCGGTCCACTAGAGCGTGGTTTTATGTCCGGTCCGATTGAGCGTGGGTTCATGTCCGGTCCAATTGATCGCGGTTTATTTTCCGGTCcgattgaaaaagaaaacaccGATCAGTTTCAGAGAAGCTTCTCTCATAGTGGATTAGGGTTTTCAGTTCGACCGAGAACGAGAAAAGAGAAATGGATTCGTGTTCTTCAGAGAGCGATTTCGAAGACGCTATCACGTGGACAGAACTCTATTGTTACTCCGATCAAAGGTGGTGTTGCTGTTAAGGAACCACCGGAGTGGATTCTTGCCGGTGAGAAACAGCATAATGAGAATTTGACTGTGAGTAGTTTGAATTTGAGTAGTGAAGGTAGTTTGGAAGATGACGATTCGTTAGGTAGTCAGAATCTTCAATGGGCTCAGGGAAAAGCAGGGGAAGATCGTGTTCATGTTGTTGTTTCTGAAGAACATGGTTGGGTTTTTGTTGGAATTTACGATGGTTTTAACGGTCCTGATGCACCGGATTATTTACTTTCGAATCTTTATACTTTTGTTCATAAGGAACTTAAAGGTTTGCTTTGGGATGATGGTGGTTCACCGGATAATTTGAATTCGAAATCGCGTGatttggttgatgatgatgatgttgttgttgggAATGAAGATAAGGTGTTTGATGATTGTTCTCAATGTGTTGATCGAGAGAAAGTGGATTCGGTTACgaagagaaaaaagagaggTAAGAATTCGAAGAATAAGTATAAAGATGCAGCGAAGAAACACGAAGAGAATCATAGGAGATGGAAGTGTGAATGGGATAGAGAGAGATTAGAGCTTGATAGAAGATTGAAGGAACAACTGAGTGGTGGTGATGGTGACGACAATTCTGTTAATCATTCGGATGTTTTGGAAGCTTTATCTCGAGCTTTGAGGAAAACTGAAGAGTCTTATCTTGATGTTGCTGATAAGATGGTGATGGAGAATCCCGAACTTGCTTTGATGGGTTCATGTGTTCTTGTAATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTTGGAGATAGTAGAGCTGTGTTGGCACAAAAAGCTGAACCTGATTATTGGATTGGGAAAATTAGACAGGATTTGGAGAGGATTAATGAAGAGACAATGCATGATCTTGAATCATGGGATGATACTGATAAATCAAATGTTGTTCCCAGTTTAAGTGCTTTTCAGCTTACCAAGGATCATAGTACTAATGTTGAAGAGGAAGTAATCAGAATAATAAAAGAGCACCCGGATGATCCTTGTGCTGTGGTCAATGATCGTGTGAAGGGATCTCTCAAGGTTACTCGAGCATTCGGCGCAGGATTTCTCAAACAGCCCAAATGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTACGTAGGAAATTCTCCATACATCACTTGCCAACCATACCTTAAACACCACAGATTAGGCCAAAAAGACAAATTTTTGATTCTATGCTCCGACGGACTCTATCAATACTTGTCAAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACATTACAACCCGAAGGAGACCCTGCTCAACATTTGGTTGAAGAAGTCTTGTTTCGTGCTGCGAAGAAAGCTGGTTTGGATTTCCACGAATTGCTCGAAATTCCACAAGGCGATAGGCGGCGTTACCACGACGATGTTTCCATCATTGTTATTTCTTTGGAAGGAAGAATATGGAGATCATGTGTATAA 2145 0.3963 MGNGIGKLTVCFTGKNGSNRKHDISILITDPLDEGLGHSFCYVRPDPTRLSSSKVHSEETTTFRTISGASVSANTSTPLSTAFMDLYSYGCFDRAAAFESSTSFASLPLQPIPKNLISSGSGPFSGNFGGGVGAFPSSGPLERGFMSGPIERGFMSGPIDRGLFSGPIEKENTDQFQRSFSHSGLGFSVRPRTRKEKWIRVLQRAISKTLSRGQNSIVTPIKGGVAVKEPPEWILAGEKQHNENLTVSSLNLSSEGSLEDDDSLGSQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTFVHKELKGLLWDDGGSPDNLNSKSRDLVDDDDVVVGNEDKVFDDCSQCVDREKVDSVTKRKKRGKNSKNKYKDAAKKHEENHRRWKCEWDRERLELDRRLKEQLSGGDGDDNSVNHSDVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWIGKIRQDLERINEETMHDLESWDDTDKSNVVPSLSAFQLTKDHSTNVEEEVIRIIKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYITCQPYLKHHRLGQKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGLDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02097 714 PANTHER - 12 714 - -
Tsu02g02097 714 SMART PP2C_4 262 703 IPR001932 -
Tsu02g02097 714 PANTHER PROTEIN PHOSPHATASE 2C 12 714 IPR015655 GO:0004722|GO:0006470
Tsu02g02097 714 SUPERFAMILY PP2C-like 275 706 IPR036457 -
Tsu02g02097 714 Coils Coil 376 403 - -
Tsu02g02097 714 Pfam Protein phosphatase 2C 418 661 IPR001932 -
Tsu02g02097 714 Gene3D - 239 710 IPR036457 -
Tsu02g02097 714 MobiDBLite consensus disorder prediction 371 392 - -
Tsu02g02097 714 CDD PP2Cc 411 705 IPR001932 -
Tsu02g02097 714 ProSiteProfiles PPM-type phosphatase domain profile. 261 705 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02097 Tsu-Chr2 20560425 20563629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02097 1 714 PP2C-type Phosphatase Gene Family AT1G07630 68.595 0.0 945
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02097 - - pvu:PHAVU_011G064200g 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02097 02 20560425 20563629 Tsu02g02097 02 20560425 20563629 ECH