Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02080 ATGATTGTTTTTGTTCATTATTTTGTGGCTACCTCAACTGCTGATAACAACAGATCCTCTGCATCAAAAGGATTCCAACCAAATGTGTATGAAGGAGAAAGAACAAGGACTCGTGATAATAACTTGTTGGGCAAGTTTGAGTTGTCTGGAATTCCTCCTGCTCCTAGGGGTGTTCCTCAGATCAATGTCTGCTTTGACATTGATGCCAATGGTATTTTGAATGTCTCAGCAGAGGATAAGACTACAGGCCAGAAGAACAAGATCACCATTACTAATGACAAGGGTAGGCTCTCAAAGGAGGAGATTGAGAAGATGGTACAAGAAGCAGAGAAGTACAAATCCGAGGATGAAGAACACAAGAAGAAAGTGGAGGCCAAAAATGCTCTTGAGAACTATGCCTATAACATGAGGAACACAATCAAGGATGACAAGATTGCTTCTAAGTTGTCTGCTGATGATaagaagaagattgaagatgCCATTGAGCAGGCTATTCAATGGCTGGATGGAAACCAACTTGCAGAGGCTGATGAATTTGAAGACAAGATGAAGGAATTGGAGGGTATTTGCAATCCTATCATTGCTAGGATGTACCAAGGTGCTGGTGGTGATGCTGGTGGAGCTATGGATGAAGATGGTCCTACAACAGGCAGCGGAAACGGTGCTGGACCCAAAATTGAGGAAGTTGATTAA 693 0.4156 MIVFVHYFVATSTADNNRSSASKGFQPNVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIASKLSADDKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELEGICNPIIARMYQGAGGDAGGAMDEDGPTTGSGNGAGPKIEEVD 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02080 230 Gene3D - 120 230 IPR029048 -
Tsu02g02080 230 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 124 205 IPR029048 -
Tsu02g02080 230 MobiDBLite consensus disorder prediction 200 230 - -
Tsu02g02080 230 Coils Coil 102 122 - -
Tsu02g02080 230 Pfam Hsp70 protein 12 199 IPR013126 GO:0005524|GO:0140662
Tsu02g02080 230 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 27 130 IPR029047 -
Tsu02g02080 230 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 22 210 - -
Tsu02g02080 230 PANTHER HEAT SHOCK PROTEIN 70KDA 22 210 IPR013126 GO:0005524|GO:0140662
Tsu02g02080 230 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 8 113 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02080 Tsu-Chr2 20244047 20246349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02080 24 230 Calmodulin-binding Proteins AT3G12580 86.603 2.64e-117 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02080 K03283 - gmx:100812707 385.956