Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02057 ATGTGTAATGCACTTTGGTTGTCACATAATAGCACAGGTTGTTTGGAGCAATTAATATGTAGATCCTTCAAAAGATATAAGAGTCACGTTAATTCACAAGTAGCTGAAGACAATGCTCTATATTCAGCCTCAGATAAGGATTTGGAAATGGTGGATTGTTTCTTTGCTTTCCATGAGGAAGCAAAAGTACTCTTTGATCCTAAACTCATTAATACCAACAAAATAGTTGAAGTTGTAGAAGATTCCGGCTTCGAAGCAGAACTTGTTAGTTCAAGATATGATATGAACAGAGTGCATTTAGGATCATATCATTCACCAAGGAGATGGGCAGCAAACATGGATGTGCTGGTTGCACTTGGAACTAATGCTGCTTATTTTTACTCAGTTTATGTTGTAATTAAAACACCGACTTTAGCTACATTTCAAGGACAAATTTCTTTGAGGCCAATTCTATGCTGA 459 0.3638 MCNALWLSHNSTGCLEQLICRSFKRYKSHVNSQVAEDNALYSASDKDLEMVDCFFAFHEEAKVLFDPKLINTNKIVEVVEDSGFEAELVSSRYDMNRVHLGSYHSPRRWAANMDVLVALGTNAAYFYSVYVVIKTPTLATFQGQISLRPILC 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02057 152 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 59 100 - -
Tsu02g02057 152 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 97 144 - -
Tsu02g02057 152 PANTHER ATP7, ISOFORM B 97 144 - -
Tsu02g02057 152 PANTHER ATP7, ISOFORM B 59 100 - -
Tsu02g02057 152 Gene3D - 47 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02057 Tsu-Chr2 20050402 20050860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02057 97 143 Primary Pumps ATPases AT1G63440 59.574 7.76e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02057 K17686 - ming:122058233 72.7886