Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02052 ATGTCTTTACAAAACAAGGGATTCTGGATGGTAAAAGGATCTGGACACGTTAGTGACAGAGAGCCAACGTTTGATAATCCTTCCAAAGTTGAACCAAAACGACCTCATCAATGGGTAATTGATGCTACTGAAGGGGATTTTTTGCCAAATAAGAAGCAAGCAATAGAAGATGCAAATGAAAGATCTAGTTCAGGATTTTCTAATGTAAATTTTACTCCATGGGAGAACAATCACAATTTTAATTCAGTCCCAAGCCAATTTATGGATAGATTATTTGGGTCTGAAACTAGGCCTGTCAATTTCACTGAAAAAAATACTTATGTTTCGGGCGATGATTCTAATGTCAGATCCAATCATTATGTACATGATGCATCTTTTGGCTTGTCTATATCTCATCCTGCTGGAGATTCTGAAGCATGTATGAATTTTGGGGGAATCAAGAAAGTCAAAGTAAATCAGGTTAAGGATTCTGGTGATGTGCAAGCTCCAGAGGAACATAATTTTGATAGGCAGATTAAGGATGATCTACATCAAGCCTATAATGGGGAAGTTGAGACAAGATCTGGATCAATAGGGCAAGCCTTTGATAAGGATGGCAATGTCACTTACATGGGACTTGCCTATGGCACTGGGGATGCCCATATCAGATCATTTGGTACCCCCTTTGGCAAAGGAGATAACACAGTCCTATCAATTGGTGAATCCTATAATAAAGAGGAACCAAGTATACTTTCTTTTGGTGGGTTCCCAGATGAACGGGGCATTATCTCTGGGAGCAGGGCTGCTGCAGACTATGACCAATTATATAATCAATCATCAATTCACGTGTCAACAACAGCTCATGAGAAAGAGTTTGATGCATCAAATTCCAATGTGGCTGCAAGTACTCCTTCGgtggcaacaaaaaaaaatgaacctgTGTCCAAAAATAAACCAGATACAAAATCAACTAGGAAAGAATCTCCAAACACCTTCCCTACAAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGTGTTCCTGTGAAGTATGTCTCAGTGTCACGGGAGGAACTTCGTGGAATTATAAAAGGCTCTACCTATCTTTGTGGGTGTCAGTCATGTAACTATTCTAAGGGTCTGAATGCTTTTGAGTTTGAAAAGCACGCGGGTTGCAAATCGAAGCATCCAAACAATCACATTTATTTTGAGAATGGGAAGACCATTTATCAAGTTGTACAGGAATTGAGGAGTACCCCTGAAAACTCATTGTTTGACACAATCCAAACTATTTTTGGTGCACCAATAAATCAGAAAGCATTTCGAATTTGGAAAGAATCATTTCAAGCAGCAACACGTGAGCTTCAGCGTATTTATGGAAAGGAAGGACGCAACCTCTAA 1383 0.389 MSLQNKGFWMVKGSGHVSDREPTFDNPSKVEPKRPHQWVIDATEGDFLPNKKQAIEDANERSSSGFSNVNFTPWENNHNFNSVPSQFMDRLFGSETRPVNFTEKNTYVSGDDSNVRSNHYVHDASFGLSISHPAGDSEACMNFGGIKKVKVNQVKDSGDVQAPEEHNFDRQIKDDLHQAYNGEVETRSGSIGQAFDKDGNVTYMGLAYGTGDAHIRSFGTPFGKGDNTVLSIGESYNKEEPSILSFGGFPDERGIISGSRAAADYDQLYNQSSIHVSTTAHEKEFDASNSNVAASTPSVATKKNEPVSKNKPDTKSTRKESPNTFPTNVRSLISTGMLDGVPVKYVSVSREELRGIIKGSTYLCGCQSCNYSKGLNAFEFEKHAGCKSKHPNNHIYFENGKTIYQVVQELRSTPENSLFDTIQTIFGAPINQKAFRIWKESFQAATRELQRIYGKEGRNL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02052 460 MobiDBLite consensus disorder prediction 18 34 - -
Tsu02g02052 460 PANTHER AUTOIMMUNE REGULATOR 1 460 - -
Tsu02g02052 460 MobiDBLite consensus disorder prediction 281 327 - -
Tsu02g02052 460 PANTHER DNA-BINDING PROTEIN 1 460 - -
Tsu02g02052 460 Pfam Tify domain binding domain 355 410 IPR032308 -
Tsu02g02052 460 MobiDBLite consensus disorder prediction 1 34 - -
Tsu02g02052 460 MobiDBLite consensus disorder prediction 281 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02052 Tsu-Chr2 20020586 20023751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02052 281 443 PHD Transcription Factor Family AT3G53680 44.512 1.94e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02052 - - gmx:100802229 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02052 02 20020586 20023751 Tsu02g02052 02 20020586 20023751 ECH