Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02048 ATGTGTGATCTTCATGCTTTGTGGAATTATGGATTGACAGATGAGAATGCTTCCTCTGTAATAGCAACAGTAGTAGTTCACAAAGAAAGGAAAATTCGCAAAGTCAAGCAGAAAAAAGGAGAATGGCTGAGGAATGGTGAAGCACCTGGAGTTGTCGGTGAAGAGAATGAGATCGGTAAGCAAGGTTTGAAGAAGAAGCTTCTTAAAGAAGGTGAAGGTTGGGATACTCCTGATGTTGGCAATGAAGTTTACGTTCATTATACTGGAACGTTGCTTGATGGTACAAATTTAATTCTAGCAGATATAGCTTTCACCTTTAAGCTTGGACAAGAGGTTGCTGCTCCCGCAAAACAGACCGCAGCTAAAAATGGGAATGTGAAGAAAGCTGTTATgccgtatttatttattttgtATGTTTCCAAATCAACCTTTTGGTTTGGAGTTGGTTCTCTTTGTCTCTTATCTTCTTGCTTTTCACAAGGTTTCAATTTTAGACATGTGGAAGCAATTCGTGAATTCAACAAAATTCTCCTGTACATCTTTCATACAAAGGTGTATGCATTGCATTAA 570 0.3737 MCDLHALWNYGLTDENASSVIATVVVHKERKIRKVKQKKGEWLRNGEAPGVVGEENEIGKQGLKKKLLKEGEGWDTPDVGNEVYVHYTGTLLDGTNLILADIAFTFKLGQEVAAPAKQTAAKNGNVKKAVMPYLFILYVSKSTFWFGVGSLCLLSSCFSQGFNFRHVEAIREFNKILLYIFHTKVYALH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02048 189 PANTHER PEPTIDYLPROLYL ISOMERASE 52 110 - -
Tsu02g02048 189 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 52 110 - -
Tsu02g02048 189 SUPERFAMILY FKBP-like 45 110 - -
Tsu02g02048 189 Gene3D - 22 131 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02048 Tsu-Chr2 19969212 19974180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02048 52 110 Calmodulin-binding Proteins AT5G48570 62.903 1.32e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02048 K09571 - han:110936549 75.8701