Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02041 ATGGCACTTTCTATTGAGAAAGATGTGTTTCCTCAACAATTTTCAACCAATGTTAGGGTTCTTGTGATTGATCATGATATCAATCATCTCAATACTATTGAGAAAATGTGCTCTCAATTCAATTACCCAGTTAATACATGCTCCAAGATTTCTGAAGCTTTGAATcttttgatggaaaaaaaagattgttttgatttgGTACTAATCGAAGCTCAAATGCCTAATGATATGGATTCATATGATTTTGTGGAATATGTTACACAAGAAATCAATATCCCTGTCATTATGATGTGTGTTGATGAAATAATAAGTGATGCAAAGAAGGCTATTGAAAACGGGGCTTGTATTTATTGGATCAAACCGTTGAAGGCAGTACCCATGAAAATTCTTGACAAGATGGATGTGGCTGGATTGACAAGAGAGCAAGTAGCTAGTCATCTGCAGaagtttaggatttatcTGAGGGAAAGAGAGGCAGAAAAGCAACAACAAATAcagaaccaaaatcaaaatgccATATTGAAATCACCATTTTGTCCTAACTTTTCTCATGCTATAGAACAACAAAATTTAATGTCATATTGTTGCAGTTCTTCTCAGCAAGTTCCAAACCATTTGATAGCAAGAAACTTTCCATATCATTTCAACAATATAATATGGCAGCAACTTCCACCACcagaatctaataataatacattGCCTCCGCAACAAGAACATCATCgacaaattaataattcattcgACGATGTTCATCAAACTAGTCCGGCTTCTGACAACCAGCAGATTCCAACGACTCAGCCACTTCCAATGTCATCATCGATAATTGGTGCTAATATCGGCGACACTGATATTAATGACAACATAACAAGGGCAGAGGAGGCAGAACTTGATTCTATCAATAGTTTACAAGAGGATGTAGTGAAGCCAAAGGAGGGAACAATTGTAGAAGAATGTGAGTCAGATAACAAAGTGAAGGGCACAGAGAATGTGCAAGGAATGAATTCTGTTAACAACAATGGTGGAATGAAGGAACCACGTAGGGGAATGAGATCACGCAAACCTAACACCATGTTGAAGGATTATGTGAGAGAATGA 1095 0.3406 MALSIEKDVFPQQFSTNVRVLVIDHDINHLNTIEKMCSQFNYPVNTCSKISEALNLLMEKKDCFDLVLIEAQMPNDMDSYDFVEYVTQEINIPVIMMCVDEIISDAKKAIENGACIYWIKPLKAVPMKILDKMDVAGLTREQVASHLQKFRIYLREREAEKQQQIQNQNQNAILKSPFCPNFSHAIEQQNLMSYCCSSSQQVPNHLIARNFPYHFNNIIWQQLPPPESNNNTLPPQQEHHRQINNSFDDVHQTSPASDNQQIPTTQPLPMSSSIIGANIGDTDINDNITRAEEAELDSINSLQEDVVKPKEGTIVEECESDNKVKGTENVQGMNSVNNNGGMKEPRRGMRSRKPNTMLKDYVRE 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02041 364 SUPERFAMILY Homeodomain-like 123 155 IPR009057 -
Tsu02g02041 364 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 123 IPR045279 GO:0009736
Tsu02g02041 364 PANTHER TWO-COMPONENT RESPONSE REGULATOR 123 260 IPR045279 GO:0009736
Tsu02g02041 364 SMART REC_2 18 133 IPR001789 GO:0000160
Tsu02g02041 364 MobiDBLite consensus disorder prediction 248 278 - -
Tsu02g02041 364 ProSiteProfiles Response regulatory domain profile. 19 135 IPR001789 GO:0000160
Tsu02g02041 364 MobiDBLite consensus disorder prediction 326 364 - -
Tsu02g02041 364 Gene3D - 11 75 - -
Tsu02g02041 364 SUPERFAMILY CheY-like 17 124 IPR011006 -
Tsu02g02041 364 Pfam Response regulator receiver domain 20 123 IPR001789 GO:0000160
Tsu02g02041 364 Gene3D - 81 155 - -
Tsu02g02041 364 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 123 152 IPR006447 GO:0003677
Tsu02g02041 364 MobiDBLite consensus disorder prediction 345 364 - -
Tsu02g02041 364 MobiDBLite consensus disorder prediction 326 341 - -
Tsu02g02041 364 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 8 123 - -
Tsu02g02041 364 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 123 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02041 Tsu-Chr2 19881701 19884148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02041 14 128 Response Regulator Gene Family AT4G16110 39.130 2.65e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu02g02041 Response_reg 7.9e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02041 - K14491 cam:101491966 131.724