Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02020 ATGGAAACACTTGGTGCATTGCTCACTATTAATGTGCACATTTTTATCCTAAGTTTATTATACTTTATGGTTACAATTGAAGCTTCAAAGAAAAATAAGGTCTCTGCCATATATGTGTTTGGAGACTCCACAGTAGACCCAGGGAACAACAATTATGTGAACACAGcttttaaaagtgattttccACCTTATGGTAGAGACCTTGCTAACAAAAGTCCTACTGGAAGGTTCTCAAATGGGAAGCTTGGCACTGATTTTATTGCTTCATATTTGGGCTTGAAAGAGTTGGTTCCACCATATTTGGATCCAAATCTCAGTGATGAAGAGCTTATGACAGGAGTTAGTTTTGCCTCAGCTGGTTCTGGTTTTGACCCACTCACACCAACTCTAAGTAATGTGGTCCCAATACCAAAGCAACTGGAATATTTCAAACAATACAAAAAGAGGTTGGAGAGTAAACTTGGTAGGCATAGAACTGAAAATCATATAAACAACGCTTTTTTCTTCGTAAGCGCAGGTACAAATGACTTCGTTATTAACTATTTTACGGTACcaataagaagaagaaactaTGACGTTGTAACCTATGGCCATTTCGTGCTTCAACATGTCAAAGATTTCATCCAGAATTTGTGGACAGAAGGTGCTAGAAAAATTGCTTTTGTTGGACTACCTCCAATGGGATGCTTGCCAATCATGATCACCTTCCATTCCAACGGTGCATTTTTTGAACGTAGTTGTGTGGACAAATATTCCGCTGTGGCAAGAGCTCACAATATGATTCTTCAACATGAATTGTTCTTAATGCAACTCAATTTCTCTAATCATCATGATCATGGTGCTAAGATCTCTTACATTGACATATATGGACCCTTAGCTAACATGATTCAAGGGCTTGGAAAACTTGGATTTGATGAGGTTCATCGTGGATGCTGTGGAAGTGGTTACATTGAAGCCACATTTATGTGTAATCGTGGTTCGCATGTGTGCTCTGATCCATCAAAATATGTATTTTGGGATTCAATACACCCTACAGAGAAGGCATACCATAACCTATTCGTCGCAAACCGTCACATCCTTGATGCCCTTGTCAAGGGCTAG 1101 0.3815 METLGALLTINVHIFILSLLYFMVTIEASKKNKVSAIYVFGDSTVDPGNNNYVNTAFKSDFPPYGRDLANKSPTGRFSNGKLGTDFIASYLGLKELVPPYLDPNLSDEELMTGVSFASAGSGFDPLTPTLSNVVPIPKQLEYFKQYKKRLESKLGRHRTENHINNAFFFVSAGTNDFVINYFTVPIRRRNYDVVTYGHFVLQHVKDFIQNLWTEGARKIAFVGLPPMGCLPIMITFHSNGAFFERSCVDKYSAVARAHNMILQHELFLMQLNFSNHHDHGAKISYIDIYGPLANMIQGLGKLGFDEVHRGCCGSGYIEATFMCNRGSHVCSDPSKYVFWDSIHPTEKAYHNLFVANRHILDALVKG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02020 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 9 364 - -
Tsu02g02020 366 CDD SGNH_plant_lipase_like 36 366 IPR035669 -
Tsu02g02020 366 Gene3D SGNH hydrolase 23 361 IPR036514 -
Tsu02g02020 366 Pfam GDSL-like Lipase/Acylhydrolase 37 352 IPR001087 GO:0016788
Tsu02g02020 366 PANTHER GDSL ESTERASE/LIPASE EXL3 9 364 - -
Tsu02g02020 366 SUPERFAMILY SGNH hydrolase 162 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02020 Tsu-Chr2 19696785 19701099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02020 13 366 Pollen Coat Proteome AT1G75930 36.944 5.62e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02020 - - gmx:100804919 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02020 02 19696785 19701099 Tsu02g02020 02 19696785 19701099 ECH