Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02017 ATGGCGAATCGTCCTGCATGTGCTGCTTGCAGACaccaaagaaaaaaatgcaGGAGAGATTGCATTCTTGCTCCTTATTTTCCAATAAACAAACTTCAAGAATATGAAGAAGCTCATAGAGTTTTTGGTTACAGCAACGTCACAAAAATGGTTCAAAACCTTGGGGAACAAGAAAGACAAAGTGCCATCAATTCTATTAAATGGGAAGCCAAGATGTGGACTCAAGATCCAATCTTTGGTCCATTTGGTGCTTACAATGATGCTTGTAAAACCATTACACATCTATGGAATCTCctccaacaacaacaagaacaagcCCATCAAAGGATTTCAATTTCTGAGCCCAATAAGTTTATGGGCCAGGCCCAAGTTTCATTACCTTTCAGTAATGAAGAAACTTTACCATTTTCAAATAATGTCAATTGGGCACATTTTGATTCCCCTTATGTGGCTAGTAACAATGTTGTACAAAATAATCCCAATTTTGAATATCCATATGTAAATTACTTTGGAGGTTCTTTGCAAAATGAGGAACCAAATGTATTGAAGTGTGTTCCTAGTGGTAATTATGTTGTGCAACCTTCACAATCTAATTATTTGCAAAGTGTGGCAAGTAGTTCTGGCACTAATGTCACAATGGATCAACATTTTCATTATTGTGATGAGAATATTGTGACCAATGAAGAGATGGGAATGCAAAGAGATGGCCAAGGAAAATATGGTATTCACACAATGGCACAAAATAGAGTAAGGAACCAAATTACAGAAATTCGCCATCCTATTCATCATCCTTTTGGACATagtaagattttattttattttttccctgCTTCTGCATGTCGTTGA 846 0.3404 MANRPACAACRHQRKKCRRDCILAPYFPINKLQEYEEAHRVFGYSNVTKMVQNLGEQERQSAINSIKWEAKMWTQDPIFGPFGAYNDACKTITHLWNLLQQQQEQAHQRISISEPNKFMGQAQVSLPFSNEETLPFSNNVNWAHFDSPYVASNNVVQNNPNFEYPYVNYFGGSLQNEEPNVLKCVPSGNYVVQPSQSNYLQSVASSSGTNVTMDQHFHYCDENIVTNEEMGMQRDGQGKYGIHTMAQNRVRNQITEIRHPIHHPFGHSKILFYFFPASACR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02017 281 PANTHER LOB DOMAIN-CONTAINING PROTEIN 2 3 210 - -
Tsu02g02017 281 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Tsu02g02017 281 Pfam Lateral organ boundaries (LOB) domain 6 100 IPR004883 -
Tsu02g02017 281 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02017 Tsu-Chr2 19671873 19672718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02017 6 102 AS2 family AT1G06280 44.330 6.50e-27 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Tsu02g02017 LOB 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02017 - - cam:101500246 254.218