Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02007 ATGGGAAAAAGGAAGGCAAAAACAAAACCACCTCCAAAGAAAAGAATGGATAAGCTCGACACTGTTTTTAGCTGTCCTTTCTGCAATCATGGCTCTAGTGTCGAGTGCCGCATTGATATGAAGAACTTGATAGGGGAAGCTTCTTGCGGAATATGTCAAGAGAGCTTTAGCACTTCCATCACAGCTTTATCTGAGGCAATAGACATATACAGTGAATGGATTGATGAATGTGAACGGGTGAACACCGTAGAAGATGATGGTGCTTAG 267 0.4232 MGKRKAKTKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTSITALSEAIDIYSEWIDECERVNTVEDDGA 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02007 88 SUPERFAMILY Zinc beta-ribbon 1 81 - -
Tsu02g02007 88 Gene3D - 16 82 IPR038567 -
Tsu02g02007 88 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
Tsu02g02007 88 PANTHER UNCHARACTERIZED 1 88 IPR007808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02007 Tsu-Chr2 19536473 19538833 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tsu02g02007 Elf1 4.3e-31 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02007 K25829 - qsu:112020125 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02007 02 19536473 19538833 Tsu02g02007 02 19536473 19538833 ECH