Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02006 ATGAAGAAGATTTCGAAGAGCAGCTGCAAGTCTTCATCACATAGGCTTTTTAAGGATAAGGCGAAGAATCGTGTTGATGATCTGCAGCTGATGTTCCTGGATTTGCAGTTTGCTAGGAAGGAGAGCCGTACGGTTGATGCTGCGGTCCTTGAGGAACAAGTCCATCAGATGCTTCGTGAGTGGAAGTCGGAGCTCAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGATGGAAGTCTTGGATCATTCTCCACCGATATCTGTCGGCTTTTGCAGCTCTGCGAGGAGGAGGATGATGCCTCCAGTCCATTAGCTGCACCTAAGCCCGAACCTAATGACCAGACTCTGCAGGCTGGGGGAAAGGTTGTTTTTCAAGAGGTCCAACAGCAACATGATTTCCCATTGGTTGATGAGCGCAAACAGTCAACCTTAGGAGTTCAAAACATGACAACTATCAACCAGGATGGGCCTGCTTTAGAATATCACCAGTTTGATTTACATCAAGACTTTGATCACGGCTTATATACTGGTTTCAATGGTACAGGTTATTCTGAGGAGGAAGCTATTCCTCATATATCTAGCTATCTACCAAGTGCATGCCCTCCTCCATCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGACTGTCCAAGGCCCGCACAAGGGTTAGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCTCTTGCTTTGAACGAAGGGCCACCAGGCATGGCTCCAGTTCTACGACCTGGGGGCATTGGTTTAAAGGATAATTTACTTTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCAGCAACTGCAAAGTCTCCATGGAATGCGCCTGAACTCTTTGATCTTTCTGTTCTTGAGGGCGAGACTATTAGGGAATGGCTCTTCTTCGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCATTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATTAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAATGGCACCTGTACGAATACGAGATTAGCAAGTGTGATGCATGTGCCTTATACCGTTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCAAAGGCAAAATTAACAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGTAAAGCTCTCTGCTGAGTTTCCGCCTGATAACAAAAGGCCTGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGGCGCTGTCTATTCAGCTTCACACAGAGTGACTCCACTAAATGGAACCTACGAATATGGTTTATCTGCACCATATGACTATCTTGTCGAGAACATGGGCGACTACTATGGGACATGA 1434 0.4575 MKKISKSSCKSSSHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKSELNEPSPASSLQQDGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQTLQAGGKVVFQEVQQQHDFPLVDERKQSTLGVQNMTTINQDGPALEYHQFDLHQDFDHGLYTGFNGTGYSEEEAIPHISSYLPSACPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDACALYRLELKLVDGKKNSKAKLTNDSVADLQKQMVKLSAEFPPDNKRPAKGRAKINAKVGMGAVYSASHRVTPLNGTYEYGLSAPYDYLVENMGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02006 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 - -
Tsu02g02006 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 477 IPR039277 GO:0006355|GO:0048578
Tsu02g02006 477 Coils Coil 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02006 Tsu-Chr2 19517588 19522513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02006 3 475 VOZ-9 Transcription Factor Family AT1G28520 70.265 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Tsu02g02006 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02006 - - gmx:100798565 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g02006 02 19517588 19522513 Tsu02g02006 02 19517588 19522513 ECH