Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02002 ATGAGTTCTGAGAATGGGTGCAAAGCAAGTGAGCTCTTTCAAGCTCAAGCTCACTTGTACAATCACATTCTTAGCTTCTTGAAACCAATGTCTATCAAGTGGGTTGTTGAACTTGGTATACCAGATATCATCCACAATCATGGCCAACCCATTACTCTTTCCCAACTTCTCTCGGCTCTTCGAATTCCCGAAGCAAAAGCCGCTCGTGTTCATAGTCTCATGCGTTTATTGGCACACAATAAGTTCTTTACAATTGTGGAAATGGAAGGGAAGGAAGCATATGCTCTTGCTCCATCATCAGAGCTGCTTGTGAAAGGCACTGACCATTGTTTATCTTCAATGGTTCAGCTGATAACAAATCCAAATCTTGTTGATTTGTATAATCATTTGGGTAAATGGACTTGTGGAGACGAGCTCACAATCTTTGAGACCGCAACCGGCCCAGGGGACTATTGGggttttatttatcaaaatccGGCACATTTGAAGTCCTTCAATGAGGCTATGGAAAGTGATTCTCATGTCATGAGATTAGCACTGAGTGATTGCAAATCAGTTTTTGAGGGTTTGAGTTCTTTGGTCGATGTTGGAGGTGGAACTGGAAACACAGCTAAAATTATTTGCGAGAGATTTCCTATGTTAAAATGCACAGTGTTGGACCTTCCCCAAATTGTGGCAGGCTTATCAGGAAATGAAAATTTGAGTTTTGTTGCCGGAAACATGTTCGAATCTATCCCTCAAGCTGATGCAGTTTTACTGAAGTGGATTTTGCATGACTGGAATGATGATGACTGTGTCAAGATACTCAAAAAATGCAAAGAAGCAGTTTTAAGAAAAGGCAAAGGAAGAAAAGTGATCATAATAGATATTGTTATAAATGAAAAGCAAGATAAGCATGAAATGACAGAAGTGAAGCTCTTCTTTAACATAGTTATGATGGCTAGTTTTAATGGAAGAGAAAGAGatgaaaaaaattggaaacaaatCTTCACAAAAGCAGGATTCACACACTACAAAATATATCCTATATTCGGTTTCAGATCACTTATTGAACTTTATGCTTAG 1065 0.3784 MSSENGCKASELFQAQAHLYNHILSFLKPMSIKWVVELGIPDIIHNHGQPITLSQLLSALRIPEAKAARVHSLMRLLAHNKFFTIVEMEGKEAYALAPSSELLVKGTDHCLSSMVQLITNPNLVDLYNHLGKWTCGDELTIFETATGPGDYWGFIYQNPAHLKSFNEAMESDSHVMRLALSDCKSVFEGLSSLVDVGGGTGNTAKIICERFPMLKCTVLDLPQIVAGLSGNENLSFVAGNMFESIPQADAVLLKWILHDWNDDDCVKILKKCKEAVLRKGKGRKVIIIDIVINEKQDKHEMTEVKLFFNIVMMASFNGRERDEKNWKQIFTKAGFTHYKIYPIFGFRSLIELYA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02002 354 PANTHER O-METHYLTRANSFERASE 2 353 IPR016461 GO:0008168
Tsu02g02002 354 Gene3D Vaccinia Virus protein VP39 104 354 IPR029063 -
Tsu02g02002 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Tsu02g02002 354 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 353 - -
Tsu02g02002 354 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Tsu02g02002 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 352 IPR029063 -
Tsu02g02002 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 354 IPR016461 GO:0008168
Tsu02g02002 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Tsu02g02002 354 Gene3D - 1 103 IPR036388 -
Tsu02g02002 354 SUPERFAMILY "Winged helix" DNA-binding domain 10 107 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02002 Tsu-Chr2 19459447 19460693 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02002 29 352 Monolignol Biosynthesis Gene Families AT5G54160 32.143 3.28e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02002 K22588 - gmx:100818724 417.542