Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g02001 ATGTTGGTTGAAATTGCAGTTGCTTTACTGGTCATTGCTCTTTTTATTCATTTCCGTCCAACGCCCACCGCTAAATCAAAAGCACTTCGCCACCTTCCAAATCCTCCTAGTCCAAAACCTCGTCTTCCATTCATCGGTCATCTTCATCTTTTAGATAATCCTCTTCTTCACCATTCTTTAATCCGTTTAGGTGAACGCTATGGCCCTTTGTATTCTCTTTACTTTGGCTCAATGCCGACTGTTGTTGCTTCCACACCTGATTTGTTTAAACTCTTTCTTCAAACTCACGAAGCTTCTTCGTTTAACACAAGGTTCCAAACCTCAGCTATTAGACGTTTAACCTATGATAACTCTGTTGCTATGGTTCCCTTTGGACCTTATTGGAAGTTCATTAGAAAGCTTATTATGAACGATCTCCTTAACGCAACCACTATTAATAAGTTGCGACCCTTGAGGAGTCAAGAAATTCGCAAGTTTCTTAAGGTTATGGCTAACAGCGCTGAAACTAAACAGCCGCTTAATGTCACTGAGGAGCTTCTTAAGTGGACAAACAGTACAATTTCAACTATGATGTTGGGTGAAGCTGAAGAGGTTAGAGATATTGCTCGTGATGTTCTTAAGATCTTCGGGGAGTATAGTATTACCGACTTCATTTGGCCTTTGaagatttttaagaaatttgGAAACTATGAGCAGAGAATTGATGCTATTTTTAATAAGTATGATCCTATCATTGAAAAGGTTATCAAGAAAAGACAAGAGATTGTGAACAAAAGAAGAAGTGGAGAAATTAAAGAGGGCGAGGAGAATGTAGTTTTTCTTGATACTTTGCTCGAATTTGCTCAGGATGAGACCATGGAGATAAAAATTACCAAGGAACAAATCAAAGGTCTTGTTGTGGATTTCTTCTCTGCTGGTACAGACTCAACCGCTGTGGCAACAGAATGGACTTTGGCGGAGCTTATCAATAATCCGAGGGTGTTGAAGAAAGCTCGAGAGGAGGTAGAATCTGTTGTAGGAAAAGATAGACTTGTTGAGGAATCGGATGTTCAAAATCTTCCTTACATTAGAGCTATTGTGAAGGAGGCATTTCGCTTGCACCCACCACTACCTGTGGTCAAGCGAAAATGTACTCAAGAATGTGAGATCAACGGGTATGTGATTCCAGAGGGAGCATTGATACTTTTCAATGTATGGCAAGTTGGAAGAGACCCAAAATATTGGGAAAAACCATTGGAATTCCGTCCTGAGAGGTTCATAGAAAATGCTGGTGAAGGCGAAGCAGCTTCAATCGATCTTAGGGGTCAACATTTCACACTTCTACCATTTGGATCTGGAAGGAGGATGTGCCCCGGTGCCAATTTGGCTACCGCGGGAATGGCCACACTACTTGCATCTATTATCCAGTGCTTTGATCTACAAGTACCCGACACATATGGACAAATATTGAAAGGTGGTGATGCTAAAGTTAGCATGGAAGAGAGACCTGGTCTCACAGTTCCAAGAGCACATCATCTCATATGTGTTCCACTTGCAAGAGCTGGTGTTGCAGCTAAACTCATTTCCTCCTAA 1572 0.4103 MLVEIAVALLVIALFIHFRPTPTAKSKALRHLPNPPSPKPRLPFIGHLHLLDNPLLHHSLIRLGERYGPLYSLYFGSMPTVVASTPDLFKLFLQTHEASSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFIRKLIMNDLLNATTINKLRPLRSQEIRKFLKVMANSAETKQPLNVTEELLKWTNSTISTMMLGEAEEVRDIARDVLKIFGEYSITDFIWPLKIFKKFGNYEQRIDAIFNKYDPIIEKVIKKRQEIVNKRRSGEIKEGEENVVFLDTLLEFAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWTLAELINNPRVLKKAREEVESVVGKDRLVEESDVQNLPYIRAIVKEAFRLHPPLPVVKRKCTQECEINGYVIPEGALILFNVWQVGRDPKYWEKPLEFRPERFIENAGEGEAASIDLRGQHFTLLPFGSGRRMCPGANLATAGMATLLASIIQCFDLQVPDTYGQILKGGDAKVSMEERPGLTVPRAHHLICVPLARAGVAAKLISS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g02001 523 Gene3D Cytochrome P450 24 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 Pfam Cytochrome P450 36 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 SUPERFAMILY Cytochrome P450 30 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Tsu02g02001 523 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 519 - -
Tsu02g02001 523 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g02001 523 PANTHER 2-HYDROXYISOFLAVANONE SYNTHASE 2 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g02001 Tsu-Chr2 19455749 19457861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g02001 32 513 Cytochrome P450 AT5G06900 37.120 2.44e-108 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g02001 K23179 K24188 ag:BAA76380 861.677