Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01999 ATGTTGGTACAAATTGCAGTAGCTTTATTGGTCATTGCTTTGTTTATCTATTTGCGTCCAACACCCACTGCTAAATCAAAAGCACTTCGCCATCTTCCAAATCCACCAAGTCCAAAACCTCGTCTTCCATTCATTggtcatcttcatcttctagatCACCCTCTTCTTCACATATCTTTAATCCGTTTAGGTGAACGTTATGGCCCTTTGTATTCTCTATACTTTGGTTCTATGCCTACTGTTGTAGCTTCAACCCCTGATTTGTTTAAACTCTTTCTTCAAACTCATGAAGCTACTTCTTTTAACACTAGGTTTCAAACTTCTGCTATTAGACGTTTAACCTATGATAACTCTGTTGCTATGGTTCCTTTTGGACCTTACTGGAAGTTTGTTAGGAAGCTTATTATGAATGATCTTCTTAATGCTACCACTGTTAATAAGTTAAGACCTTTGAGGAGTAAAGAAATCCGTAAGGTTCTTAATGTTATAGCTAACAGTGCTGAAACTCAACAGCCACTTAATATAACTGTTGAGCTTCTTAAGTGGACTAATAGTACGATTTCAACTATGATGTTGGGTGAAGCTGAAGAAGTTAGAGATATTGCTCGTGATGTTCTTAAGATCTTTGGTGAATATAGTGTTACTGATTTCATTGGACCTTTGaagattttcaagaaatttGGAAACTATGAGCAGAGGATTGATGCTATTTTTAATAAGTATGATCCTATTATTGAAAGGGTTATTAAGAAAAGACAAGGGATTGTtaacaaaagaagaaatggAGAAATTCTTGTTGGTGAAGAGGAGAACGTAGTTTTTCTTGATACTTTGCTTGAATTTGCTCAGGATGAAACCATGGAGATCAAAATTACCAAGGAACAAATCAAAGGTCTTGTTGTGGATTTCTTCTCTGCTGGTACAGATTCAACGGCTGTGGCAACAGAATGGACTTTGGCGGAGCTTATCAATAATCCGAGGGTGTTGAAGAAAGCTCGCGAGGAGGTAGAATCGGTTGTTGGAAAAGATAGACTTGTTGATGAAACAGATGTTCAGAATCTTCCTTACATTAGAGCAATGATTAAGGAGGTATTCCGCTTGCACCCACCACTACCCGTGGTTAAGAGAAAATGTACCGAAGAGTGTGAGATTAACGGGTATGTGATCCCAGAGGGAGCATTGATACTTTTCAATGTATGGCAAGTTGGAAGAGATCCAAAATATTGGGAGAAACCATTGGAATTTCGTCCTGAGAGGTTCTTAGAAAATGCTGGTGAAGGCGAAGGTGAAGCGTCTTCAATTGATCTTAGGGGTCAACATTTCACACTTTTACCATTTGGGTCTGGAAGAAGAATGTGTCCTGGAGTCAATTTGGCTACGGCTGGAATGGCTACACTACTTGCATCAATTATCCAATGCTTTGAACTACAAGTACCTGGTCCTAATGGACAAATATTGAAAGGTAGTGATGCTAAGGTTAACATGGATGAGAGACCTGGTCTATCTGTTCCAAGAAAACAAAATCTTGTTTGTGTTCCACTTGCAAGAGCTGGTGCAGCTAAACTCCTTTCCTCTTAA 1578 0.3764 MLVQIAVALLVIALFIYLRPTPTAKSKALRHLPNPPSPKPRLPFIGHLHLLDHPLLHISLIRLGERYGPLYSLYFGSMPTVVASTPDLFKLFLQTHEATSFNTRFQTSAIRRLTYDNSVAMVPFGPYWKFVRKLIMNDLLNATTVNKLRPLRSKEIRKVLNVIANSAETQQPLNITVELLKWTNSTISTMMLGEAEEVRDIARDVLKIFGEYSVTDFIGPLKIFKKFGNYEQRIDAIFNKYDPIIERVIKKRQGIVNKRRNGEILVGEEENVVFLDTLLEFAQDETMEIKITKEQIKGLVVDFFSAGTDSTAVATEWTLAELINNPRVLKKAREEVESVVGKDRLVDETDVQNLPYIRAMIKEVFRLHPPLPVVKRKCTEECEINGYVIPEGALILFNVWQVGRDPKYWEKPLEFRPERFLENAGEGEGEASSIDLRGQHFTLLPFGSGRRMCPGVNLATAGMATLLASIIQCFELQVPGPNGQILKGSDAKVNMDERPGLSVPRKQNLVCVPLARAGAAKLLSS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01999 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Tsu02g01999 525 SUPERFAMILY Cytochrome P450 30 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PANTHER 2-HYDROXYISOFLAVANONE SYNTHASE 2 522 - -
Tsu02g01999 525 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 522 - -
Tsu02g01999 525 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 Gene3D Cytochrome P450 24 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01999 525 Pfam Cytochrome P450 36 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01999 Tsu-Chr2 19415227 19417330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01999 1 516 Cytochrome P450 AT5G06900 35.674 9.39e-106 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01999 K23179 - ag:BAA76380 823.928