Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01998 aTGGCTTTGAGTTCAAACGGTTCTTCTGAAGAAAGTGAACTGTATCATGCTCAGATCCATTTGTACAAACATGTATACAACTTTGTAAGTTCCATGGCACTTAAATCTGCTATGGAACTTGGCATAGCTGATGCAATCCATAACCATGGAAAACCAATAACTCTTGATGAATTAGCTTCAACTTTGAAACTCCACCCCTCAAAAGTTAACATCCTATATCGATTTTTGCGCTTGTTAACACACAATGGTTTCTTTGCAAAAACAACACTGAAAAACAAAGAAGGGGAGGAAGAAATAGCATATTCTCTTACaccatcttcaaagcttctagTAAGTGGTAAACCAACATGTTTATCATCAATTGTTAAAGGAGCACTTCATCCTAGTTCTTTAGACATGTGGAGTGCTTCAAAGAAATGGTTCAATGAAGAAAAGGAACAAACACTTTATGAATGTGCAACAGGGGAGAGTTTTTGGGATTTTCTTAACAAAGATACTGAATCTGATACTTTGAGTATGTTTCAAGATGCTATGGCTTCTGATTCTAGAATGTTTAAGCTTGCTCTTAAAGAGAACAAACATGTTTTTGAGGGTTTGGAGTCTCTTGTTGATGTGGCTGGTGGAACTGGTGGTGTCACAAAACTCATTCATGATGCTTTTCCTAACATCAAATGCACTGTTTTTGATCAACCACAGGTTGTTGGTAATTTAACTGGAAATGAAAATTTAAACTTTGTTGGTGGTGATATGTTCAAATCTATCCCTCCTGCAGATGCTGTTTTACTCAAGTGGGTTCTTCATGATTGGAATGATGAACAATCCTTAAAGATATTGAAGAACAGCAAAGAAGCTATTTCACACAAAGGGAAAGACGGAAAAGTGATTATCATCGACATATCAATTGATGAAACAAGTGATGATCATGGATTAACTGAGTTGCAATTGGACTATGACTTGGTGATGCTTACAATGTTTCTTGGTAAAgaaagaacaaagaaagaatgggATAAACTCATACGTGATGCAGGTTTCAGCAGCTACAAGATATCCCCTATATCTGGTTTCAAGTCTCTCATTGAAGTTTatccttaa 1092 0.3462 MALSSNGSSEESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPITLDELASTLKLHPSKVNILYRFLRLLTHNGFFAKTTLKNKEGEEEIAYSLTPSSKLLVSGKPTCLSSIVKGALHPSSLDMWSASKKWFNEEKEQTLYECATGESFWDFLNKDTESDTLSMFQDAMASDSRMFKLALKENKHVFEGLESLVDVAGGTGGVTKLIHDAFPNIKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIPPADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDHGLTELQLDYDLVMLTMFLGKERTKKEWDKLIRDAGFSSYKISPISGFKSLIEVYP 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01998 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 362 IPR029063 -
Tsu02g01998 363 Gene3D Vaccinia Virus protein VP39 111 363 IPR029063 -
Tsu02g01998 363 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 6 363 - -
Tsu02g01998 363 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 363 IPR016461 GO:0008168
Tsu02g01998 363 PANTHER O-METHYLTRANSFERASE 6 363 IPR016461 GO:0008168
Tsu02g01998 363 Pfam O-methyltransferase domain 134 345 IPR001077 GO:0008171
Tsu02g01998 363 PIRSF O-mtase 1 363 IPR016461 GO:0008168
Tsu02g01998 363 SUPERFAMILY "Winged helix" DNA-binding domain 11 114 IPR036390 -
Tsu02g01998 363 Gene3D - 3 110 IPR036388 -
Tsu02g01998 363 Pfam Dimerisation domain 32 80 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01998 Tsu-Chr2 19390149 19392008 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01998 7 349 Monolignol Biosynthesis Gene Families AT5G54160 32.692 4.65e-45 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01998 K22588 - ag:AAY18581 639.417