Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01993 ATGGATTTGATTGATCTCAACACTACTGAGGATGATGAAACTACAAGTATAGCTAGTGCTATTGGTTCTGTTTCTGGTTCTTCTATTTGTGTGGAGCTATGGCATGCGTGTGCTGGTCCTATGATATCTTTGCCGAAGAAAGGAAGTGTTGTTGTGTATTTTCCTCAAGGACACTTGGAACAACTTCATGATTTTCCTTTATCTTTTTCTGATAATATACCTTCTCATGTTTTCTGTCGTGTTGTTGATATAAAGCTTCATGCTGAGGAAGGGAGTGATGAGCAAATGCAACAAAAGTTGAAGGACGGGGGAGTTGACGTTGATGGTGAAGGAGAGGATACTGATACTGTTATGAAGTCAACAACAACTCACATGTTTTGTAAGACTTTGACTGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTCGTCGAGCAGCTGAAGATTGCTTTCCTCCCATGGtacttaatttaaatattt 484 0.3967 MDLIDLNTTEDDETTSIASAIGSVSGSSICVELWHACAGPMISLPKKGSVVVYFPQGHLEQLHDFPLSFSDNIPSHVFCRVVDIKLHAEEGSDEQMQQKLKDGGVDVDGEGEDTDTVMKSTTTHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPMVLNLNI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01993 161 Gene3D - 123 160 IPR015300 -
Tsu02g01993 161 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 18 155 IPR044835 GO:0003677|GO:0006355|GO:0009725
Tsu02g01993 161 PANTHER AUXIN RESPONSE FACTOR 18 155 - -
Tsu02g01993 161 SUPERFAMILY DNA-binding pseudobarrel domain 116 155 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01993 Tsu-Chr2 19336612 19337799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01993 25 155 B3 DNA Binding Superfamily AT5G60450 53.642 1.02e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01993 K14486 - gmx:100808119 226.868