Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01986 ATGACATGGTGCAATGGCTCAAATGATCAAGATAGAGGCATTGAAGCAATCACATCCCCCATTATTCCTAGAACAACAAGCAATGAAACTACTCTTGTTATTCATCAAGACACAAAACAACCCCAAATTCAAACCTTAACTTGTCCCTCATGTGGCCATAATATTGAAATCAAAGATAAgAGTGGAATCAATGAATTGCCGGGGTTACCAGCTGGAATGAAATTTGATCCAAATGACCAAGAAATACTACAACACTTGGAAGCAAAAGTTTTGTTTGATGTGAAAAAACTTCATCCTCTCATTGATGAGTTCATACCAACACTTGATGGAGTGAATGGAATATGTTGTACACATCCAGAAAAGCTACCAGGTGTAAGAAAAGATGGACAGATCAGACACTTCTTTCATAGGCCATCTAAAGCATACACAACtggaacaagaaaaagaagaaaggttGATACTGATAAAGATGGAAGTGAGACAAGATGGCATAAGACAGGGAAAACAAGACCAGTTTTCATTGGTGGTGTTATGAAAGGTTTCAAAAAGATTCTAGTTCTCTACACTAACTATGGAAGGCAAAAGAAACCTGAGAAGACTAATTGGGTGATGCACCAATACCATCTTGGTAGTaatgaagaagagaaagatggTGAATTAGTTGTTTCAAAAGTCTTCTACCAAACACAACCTAGACAATGTGGTGGTAATAGTAATGCTCTTATTATAAATGATGCTTATGAAAATGAACTTATGAGTGCTCAAGGAAATGTCCAAGATGACAATGAAGCTCCTCCTCCTATGGATTACTACAATTCTCATTACATGAATTATGAAAATGTTGTTGGTCATAATTTGGAAAGCTCATCAATGCCTCAATTTATTCCAAACATGGTTATGCAAGGTGGTGATAATTCTTCCTTTATTGGATTAGCAATGGATGCAAGCAATGCAAGGTTGGACAGAAATTAG 972 0.3498 MTWCNGSNDQDRGIEAITSPIIPRTTSNETTLVIHQDTKQPQIQTLTCPSCGHNIEIKDKSGINELPGLPAGMKFDPNDQEILQHLEAKVLFDVKKLHPLIDEFIPTLDGVNGICCTHPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVDTDKDGSETRWHKTGKTRPVFIGGVMKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFYQTQPRQCGGNSNALIINDAYENELMSAQGNVQDDNEAPPPMDYYNSHYMNYENVVGHNLESSSMPQFIPNMVMQGGDNSSFIGLAMDASNARLDRN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01986 323 Coils Coil 244 264 - -
Tsu02g01986 323 SUPERFAMILY NAC domain 64 228 IPR036093 GO:0003677|GO:0006355
Tsu02g01986 323 MobiDBLite consensus disorder prediction 142 164 - -
Tsu02g01986 323 ProSiteProfiles NAC domain profile. 69 228 IPR003441 GO:0003677|GO:0006355
Tsu02g01986 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 304 IPR044799 GO:0003700
Tsu02g01986 323 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 304 - -
Tsu02g01986 323 Gene3D NAC domain 78 232 IPR036093 GO:0003677|GO:0006355
Tsu02g01986 323 Pfam No apical meristem (NAM) protein 70 209 IPR003441 GO:0003677|GO:0006355
Tsu02g01986 323 MobiDBLite consensus disorder prediction 146 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01986 Tsu-Chr2 19232016 19236388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01986 1 240 NAC Transcription Factor Family AT4G28500 68.050 7.57e-118 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tsu02g01986 NAM 9.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01986 - - gmx:100795920 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01986 02 19232016 19236388 Tsu02g01986 02 19232016 19236388 ECH
Tsu08g04027 08 58504364 58510868 Tsu02g01986 02 19232016 19236388 ECH