Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01985 atgaaagaacaaaaacaacaacaaatcccTTTCATTTACATTTACATTGTTGTTCTATCAACAATCTTATCTCTATCAACAACAGTAACATCATTGAACCAAGAAGGTTTATACCTATACCAATTCAAACTTACCTTAGACGATCCAGACTCGTCACTTTCTTCATGGAACCCAAAAGACACAACCCCATGTAACTGGTACGGTATAACCTGCGACACCACAAACACCACCGTAACCGAACTTAACCTCTCTGACACAAACATTCAAGGTCCATTCACAGCATCAATTCTCTGCCGTCTCCCTAATCTCTCTTCCATCAACCTCTTCAATAATTCCATTAACCAAACATTCCCTCTCCAAATCTCTCTctgtaaaaatctcatccatcTTGATCTCTCCCAGAATCTCCTCACTGGTCCTCTCCCACAATCACTCTCTCTCCTCCCTAACCTCCGTTACCTCGACCTAACGGGTAACAATTTCTCTGGTTCAATTCCTCCTTCTTTCGGAACATTCCAGAAACTCGAGGTTTTATCATTAGTCTCGAATCTTCTAGAAGGTACTATTCCTCCTTCTTTAGGTAACATAACTACTTTAAAAATGCTTAATCTATCTTACAACCCGTTTTTCCCGGGTCGGATTCCCTTAGAGCTCGGAAATTTAACTAACCTTGAAGTTCTATGGTTAACACAATGTAATCTCGTTGGTGTTATTCCTGAAACGCTTGGGAAACTTAAGAAGCTTAAAGATTTGGACCTTGCTTTGAACGATTTATATGGTTCTATACCGAGTTCACTCACTGAGTTAACTAGTTTGAGACAGATTGAGTTGTATAATAACTCGTTATCTGGTGAGTTGCCTCGGGGAATGGGGAATCTTACTTCGTTGAGGCTACTTGATGCTTCGATGAATCATTTAACGGGGAGGATTCCGGTGGAGCTTTGTTCTTTGCCGTTGGAGAGTCTTAATTTGTATGAGAATCGTTTTGAAGGCGAGTTACCGGCGAGTATAGCTGACTCGCCGAATTTGTATGAGTTGAGATTGTTTGGAAACCGGCTTACCGGAAAGTTACCGGAGAATCTTGGGAAACGTTCTCCGTTGAGGTGGCTTGATGTTTCGAGTAATCAGTTTTTGGGGAGCATTCCGGCGAGTTTGTGTGATCTTGGTGAGTTGGAGGAGCTTCTTatgatatataatttgtttaCCGATGAGATTCCGGCTAGTTTGGGCACGTGTCAGAGTTTGACGCGTGTTCGTTTAGGTTATAATAGGTTTTCCGGTGAGGTTCCGGCGGGGATCTGGGGTCTACCTCATGTTTATCTGCTTGAGCTTGCTCATAACTCGTTTTCCGGTTCCATTTCGAAGACTATTGCCGGAGCAGGGAACCTTTCGTTGTTGATTTTGTCAAACAACAACTTCACCGGAACTGTTCCCGATGAGGTTGGATGGTTGGAAAATCTTGTCGAGTTTTCTGCCGGTGATAACTTGTTCAGTGGCTCACTTCCTGATAGTTTGGTGAATCTTGGCCAGCTTGGGATTCTTGATTTTCACAACAATAGGCTCTCTGGGGAATTACCAAAGGGGATTCATTCTTGGAAAAAGCTCAATGATTTGAATTTGGCTAATAATGAGATTGGTGGGAAGATTCCTGATGAAATTGGTAGCTTATCTGTGCTTAATTTTCTCGATCTTTCTCGGAATCAATTTTCCGGGAAAATCCCTCATGGGTTGCAGAATCTTAAGCTCAATCAGCTGAACTTATCGTATAATCGTCTTTCGGGAGAACTTCCTCCTCAGATGGCTAAGGAAATGTACAAGTCTAGCTTCCTTGGTAATCCTGGTTTGTGTGGAGATTTGAAAGGTTTGTGTGATGGTAGAAATGAAGTAAAGAACTTGGGTTATATTTGGTTGCTTCGAGTAATTTTCCTTGTTGCTATTTTGGTGTTACTTGTTGGTGTTGTCTTGTTCTACTTTAGGTACAAGAATTTCAAGGACGCAAAAAGGGCTATCGATAAATCGAAATGGACTTTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAATTGTCTTGATGAAGATAATGTCATTGGAAGTGGTTCATCCGGGAAGGTTTACAAGGTTGTACTTAATAGTGGAGAAGCTGTTGCTGTGAAGAAGATATGGGGAGGTGTTAGGAAGGAAGTCGAGAGTGGAGATGTTGAGAAAGGTAGGGTTCAAGACAATGCTTTTGATGCAGAGGTCGAAACTCTTGGAAAAATCCGACACAAGAACATTGTCAAGCTATGGTGTTGCTGTACCACTAGGGATTCCCAGCTTTTGGTTTATGAGTATATGCAAAATGGTAGTCTTGGTGATTTGCTTCATAGCAGTAAAGGAGGGTTGTTGGATTGGCCAACAAGATACAAGATAGCCGTGGATGCTGCCGATGGACTCTCTTATCTGCATCATGACTGTGTTCCCCCAATTGTTCATAGAGATGTTAAATCTAACAATATCTTGTTGGATGGGGACTTTGGTGCAAGAGTGGCGGATTTTGGATTAGCTAAGGTTGTCGAAACCACGGGTAAAGGGATTAAATCCATGTCCATCATAGCTGGTTCTTGTGGCTATATTGCACCAGAATATGCATACACACTCAAAGTGAATGAGAAGAGCGACATTTATAGCTTTGGCGTTGTTTTACTTGAGTTGGTTACCGGAAGACGCCCCGTGGATCCTGAATTTGGAGAGAAAGATTTAGTCAAGTGGGTTTGCACTACTTTGGATCAAAAAGGTGTGGATCATGTACTTGACTCAAGGCTCGATTCATGTTTCAAAGAAGAAATTTGCAAGGTCTTCAACATTGGCCTCATGTGTACTAGTCCTCTTCCAATCAACCGGCCTTCAATGAGAAGAGTAGTGAAAATGTTGCAAGAAGTAGGAATAGAGAACCAAATGAAACCTGCAAAGAAAGATGGAAAATTAACACCTTATTACTATGATGATGTCTCAGATCATGGAAGTGTTGTTTGA 3024 0.4084 MKEQKQQQIPFIYIYIVVLSTILSLSTTVTSLNQEGLYLYQFKLTLDDPDSSLSSWNPKDTTPCNWYGITCDTTNTTVTELNLSDTNIQGPFTASILCRLPNLSSINLFNNSINQTFPLQISLCKNLIHLDLSQNLLTGPLPQSLSLLPNLRYLDLTGNNFSGSIPPSFGTFQKLEVLSLVSNLLEGTIPPSLGNITTLKMLNLSYNPFFPGRIPLELGNLTNLEVLWLTQCNLVGVIPETLGKLKKLKDLDLALNDLYGSIPSSLTELTSLRQIELYNNSLSGELPRGMGNLTSLRLLDASMNHLTGRIPVELCSLPLESLNLYENRFEGELPASIADSPNLYELRLFGNRLTGKLPENLGKRSPLRWLDVSSNQFLGSIPASLCDLGELEELLMIYNLFTDEIPASLGTCQSLTRVRLGYNRFSGEVPAGIWGLPHVYLLELAHNSFSGSISKTIAGAGNLSLLILSNNNFTGTVPDEVGWLENLVEFSAGDNLFSGSLPDSLVNLGQLGILDFHNNRLSGELPKGIHSWKKLNDLNLANNEIGGKIPDEIGSLSVLNFLDLSRNQFSGKIPHGLQNLKLNQLNLSYNRLSGELPPQMAKEMYKSSFLGNPGLCGDLKGLCDGRNEVKNLGYIWLLRVIFLVAILVLLVGVVLFYFRYKNFKDAKRAIDKSKWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLNSGEAVAVKKIWGGVRKEVESGDVEKGRVQDNAFDAEVETLGKIRHKNIVKLWCCCTTRDSQLLVYEYMQNGSLGDLLHSSKGGLLDWPTRYKIAVDAADGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGLAKVVETTGKGIKSMSIIAGSCGYIAPEYAYTLKVNEKSDIYSFGVVLLELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHVLDSRLDSCFKEEICKVFNIGLMCTSPLPINRPSMRRVVKMLQEVGIENQMKPAKKDGKLTPYYYDDVSDHGSVV 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01985 1007 SUPERFAMILY Protein kinase-like (PK-like) 690 975 IPR011009 -
Tsu02g01985 1007 Gene3D Transferase(Phosphotransferase) domain 1 782 998 - -
Tsu02g01985 1007 Pfam Leucine rich repeat 101 161 IPR001611 GO:0005515
Tsu02g01985 1007 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Tsu02g01985 1007 Gene3D Ribonuclease Inhibitor 319 626 IPR032675 -
Tsu02g01985 1007 Gene3D Ribonuclease Inhibitor 188 316 IPR032675 -
Tsu02g01985 1007 Gene3D Ribonuclease Inhibitor 32 187 IPR032675 -
Tsu02g01985 1007 SUPERFAMILY RNI-like 227 588 - -
Tsu02g01985 1007 SMART LRR_typ_2 221 244 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 148 174 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 556 579 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 508 531 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 388 412 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 100 124 IPR003591 -
Tsu02g01985 1007 SMART LRR_typ_2 269 293 IPR003591 -
Tsu02g01985 1007 SUPERFAMILY L domain-like 55 317 - -
Tsu02g01985 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Tsu02g01985 1007 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 12 989 - -
Tsu02g01985 1007 SMART serkin_6 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01985 1007 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Tsu02g01985 1007 Gene3D Phosphorylase Kinase; domain 1 678 781 - -
Tsu02g01985 1007 Pfam Protein kinase domain 696 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01985 1007 ProSiteProfiles Protein kinase domain profile. 694 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01985 1007 PANTHER LRR RECEPTOR-LIKE KINASE 12 989 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01985 Tsu-Chr2 19192879 19197239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01985 28 1007 Receptor kinase-like Gene Family AT1G28440 71.327 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu02g01985 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01985 - - gmx:100819887 1651.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01985 02 19192879 19197239 Tsu02g01985 02 19192879 19197239 ECH
Tsu08g04032 08 58586957 58591134 Tsu02g01985 02 19192879 19197239 ECH