Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01981 ATGGCTTCTAAAAATGCCTTATTCAAAGCAAGTGAGCTTTTCCAAGCTCAAACTCACTTGTACAAAATCATGTATAGTTTCCTTAATCCAATGTCTGTTAAATGGGCACTTGACCTTAAAATACCAGACATCATCCACAATCATGGCCAACCCATTACTCTTTCCGAACTTGTATCAGCTCTTAATATTCCACAATCAAAAGAAACACGTGTCGAACGACTCATGCGATTATTAGCACACATTGATTTATTTGCAATTGTCAAAATTGATGAGAGCAAAGTAGGATATGCTCTTACTCCAACATCACAACTCCTTGTCTCTGACACTGATCATTGCTTATCTTCcatggttcggtttttaaacaCTCCAAATCTCGTTGATTCGTATAATCATTTAGCGAAATGGACTTCTGGGGAGGATCTCACAATAAAGTTGACGGAACAAAACgaccgtggTTATTGGGATTTCATTCATCAAAATTCTGCATACTTGAATACTTTTAATGAGGCTATGGAAAGTGATTCTCATGTTGTGAGGTTGGCTTTGAGAGAATGTAGGTCTGTTTTTGAAGGGATTGGTTCGTTGGTCGATGTTGGTGGTGGAACTGGAAACACAGCTAAGATTATATGTGAGGCATTTCCGGAGCTCAAGTACATTGTCTTGGACCTTCCACAAGTTGTTTCTGGTTTAGAAGGAAGCAATAACTTGAGTTTTGTTGGTGGGAATATGTTTAAGTCTATCCCTCAAGGTGATGCTGTTTTGCTCAAGTGGGTGTTACACAATTGGAGTGATGATGATTGCATTAAGATACTCAAAAATTGCAAGGCTGCTATATCAGGAAAAGGGAAAGGAGGAAAAGTGATAATCATAGATATCGTAATTAATGAAAAACAAGATGAGCATGAAATGACAGAATGTCTTGCACAAGTTATACCAGACTTTGATGTAACAGATGCTATGTAA 963 0.3655 MASKNALFKASELFQAQTHLYKIMYSFLNPMSVKWALDLKIPDIIHNHGQPITLSELVSALNIPQSKETRVERLMRLLAHIDLFAIVKIDESKVGYALTPTSQLLVSDTDHCLSSMVRFLNTPNLVDSYNHLAKWTSGEDLTIKLTEQNDRGYWDFIHQNSAYLNTFNEAMESDSHVVRLALRECRSVFEGIGSLVDVGGGTGNTAKIICEAFPELKYIVLDLPQVVSGLEGSNNLSFVGGNMFKSIPQGDAVLLKWVLHNWSDDDCIKILKNCKAAISGKGKGGKVIIIDIVINEKQDEHEMTECLAQVIPDFDVTDAM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01981 320 SUPERFAMILY "Winged helix" DNA-binding domain 11 109 IPR036390 -
Tsu02g01981 320 Gene3D Vaccinia Virus protein VP39 106 316 IPR029063 -
Tsu02g01981 320 PANTHER O-METHYLTRANSFERASE 7 305 IPR016461 GO:0008168
Tsu02g01981 320 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Tsu02g01981 320 Pfam O-methyltransferase domain 130 306 IPR001077 GO:0008171
Tsu02g01981 320 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 320 IPR016461 GO:0008168
Tsu02g01981 320 PIRSF O-mtase 1 318 IPR016461 GO:0008168
Tsu02g01981 320 Gene3D - 2 105 IPR036388 -
Tsu02g01981 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 303 IPR029063 -
Tsu02g01981 320 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 7 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01981 Tsu-Chr2 19122080 19134327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01981 30 310 Monolignol Biosynthesis Gene Families AT5G54160 30.662 1.68e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01981 K22588 K13262 gmx:100813225 333.569