Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu02g01979 | ATGGCAAGGACATCCCAGGAGTATCAATATCTACCAAACCAGTCTGGCATTAAATCTGATGCTTTTGGACAGTTCGGCCAATCTCATTTACATACTCCGAAGGAGGGTCCTTCGAGAAACTCTCCACTACCTAGAATTCATGCCACCAAGGGTCATTCTTCTCGTGTTTCTCTTTTGTCTCAACAAGACAAGAAAGGGAGTCCCTACCGGTCTCCTCCTGGGGATGATGATGTTGTCCCTACACAGGAATTGTACACAAACATGGCGAATGTTGGAATGAACTCCCACCAAACTGATTCCCAAACTGGTGGGTCAGAAAATCCCTATGCTTCACCCAGTGGACAAATTTTGCAAAACAATGCAACGCATAATGAGAGGAAACGGAAGGGTGATGATGGCAAAATTCCAAGGGATGTTGAAGCCAATGAGATGAGAATCCAGAAAGAGCTCGAAAAACAAGATAACCTTAGAAGAAAGaatgaGGAGCGGATAAGGAAAGAAATGGAGAGACAAGATCGTgaaagaaaaaaggaagaagagaGATTGATGCGTGAGAGACAGCGTGAAGAGGAAAGAACAAAACGAGAGGAAAAACGTGAAATTGAACGAAGGGAAAAGTATCTGCTGAGAGAAAATTTAAAAGCTGAGAGAATGAGGCAAAAAGAAGAGCTTCGGAAAGAGAAAGAGGCAGAGAGAAGGAAAGCTGCCCTTGAGAAGGCACATGCCCGTAAAATAGCTAAGGAATCCATGGAACTTATTGAGGATGAACAGCTGGAAATGATGGAGTTAGCTGCTTCAAGCAAGGGGCTTTCCTCTATTATCCGTCTTGATTTTGATACTTTGCAAAACATTGAATCATTTAGGGGTTCACTGTGTGTTTTCCCACCCGAGAATGTAAAGCTAAGAAAACCGTTTGCTATCCAACCGTGGTTCAACTCAGAAGAGAATGTTGGCAACCTTCTCATGGTTTGGAGGTTTTTGATTACCTTTGCTGATGTTCTGGAATTATGGCCTTTTACTCTTGATGAGTTCGTGCAAGCATTTCACGATTACgATTCAAGATTGTTAGGTGAGATACATGTTGCTATCCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACGCCTGTTACAGGATTAGGAATGAATCAGAATGGTGCCGCTAATTCTGGAGGTGGCCATCCAGAGATTGTAGAAGGGGCATATGCATGGGGCTTTGACATACGGAATTGGCATAAGCACTTAAATCAATTGACATGGCCAGAAATTTTCCGACAGCTAGCATTGTCTGCAGGATATGGACCACAGTTTAAGAAAAGAAGTATTACAAGTTCACGTGCAAATACTAAAGATGAGGGAAGAAGTTGTGAAGATACCATTTCTGCACTTCGTAATGGTTCAGCAGCTGAAAATGCTGTGGCAAAAATGCAGGAGAGAGGTCTATTAGGACCTCGAAGATCTAGGCATCGGTTAACTCCTGGAACAGTTAAGTTTGCAGCATTTCACGTTCTCTCGCTAGAGAGTGGTGAGGGATTGAATGTAATAGAGCTTGCCGAAAAAATTCAGAAATCTGGTCTTCGGGACCTGACAACAAGCAAGACACCCGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCCAAGCTTTTTGAAAGAGTAGCCCCATCAACTTATTGTGTACGTGCTGCATTTAGGAAGGATCCTGCTGATGCTGAGTCCATTCTTTCCGAAGCAAGaaagaaaattcaaatatttgaaaatggGTTTCTAGCTGAGGAAGATGCTGATGATGGTGAAAGAGAAGAGTCAGAAAGTGAAGTCGATGAGGATCCTGAAGTTGATGATTTGGTTAATCCTTCAAGTGTTAACAAAACATCTGAACATTGTAATGATTTTTCATCAAGTGGAAAAGAAAATCTAGGTCATGATGCAGAACTTAAAGACGAGTTCGATAAGGATCTGCCTTGTTATCCTGACAATGGTTCTAAGAGTGCTGATCGTCCGCGTGCAGTTTCTGGACAACCTGTTGCTTGTGAAAATCTAAATGCCAGAAATCTAGGTGAAGATAACATGGAAATTGATGAAAGTAAGTCTGGAGAGTCTTGGATTCAAGGGCTTACTGAAGGAGAATATTCTGATCTCAGTGTAGAGGAGCGATTAAATGCTCTTGTTGTATTGGTTGGTGTGGCaaatgaaggaaattcaatACGTGTTGTTCTCGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAGCAAATGTTGGCAGAAGGACAGATAGATAAAATTCGCCTGAAAGATGATAATGTCATTAAATCAGATTTTCCTGCTATCAAGGTTGAAACACAGCCTACATGTGCTGCTGTGGAGGGCAACCAAAGCCCATTGCTTGATATTAATAgttgcaataataataataataatgaggaATCTCCCagcaaaacagaaaataaaagacTAGCTCTTGTTGGACAAAACCTGTCTGAAAAGCTCTCATCAAGTCAAGATCTCTGCATAGGTCCTGATAGTTCTCAGACCCTGTTATCTGCTCAATATTCAAAACGGTCACGATCTCAATTGAAGTCTTATATTTCCCACCTAGCAGAGGAGATGTACATCTATAGATCTTTACCCCTTGGGCAAGACCGCAGACATAATCGATATTGGCAATTTGTTGCATCTGCTTCTTGCAATGATCCTGGTTCGGGAAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCTGAAGAGGCCTTTGACGCCCTTCTGAACTCACTGGATTCACGTGGGATCAGGGAATCTCATTTGCGTCTAATGTTGCTAAAGATTGAGAATATATTTAAGGAAAATGTTCAAAAGAATGCAAAATGTGCCAAAATCGGGAACACAGATGAAATCCGTGTTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGACAACCATACTAGATCTGACAGTCCTAGTAGTACTCTTTGTGGCTTGAGCTCTGATACTTCAGAAGCTTCGTCATCCTTCAGAATTGAGCTTGGGAAAAGTGAGAGCGACAAGAAAGCTGCCTTGGGAAGATATCAAGATTTTCAAAAATGGTTGTGGAAAGAATGTTATAATCCATCGATATTATGTGCAATGAAATATGGGAAAAAGAGATGCAAACCTCAGGTTGACATATGTGATACCTGTCTCGACCTTTATTGCTTGGAAGATTCCCATTGCAGTTATTGCCACCGCACTTTTCCACCAAATGATggatttaatttttctaaacaTGCTTTTGAATGTGGAGACAAGTTAcctaaaaatatttgtattttggaTTCTTCTCTTCCTTTGCGGACAAAACTTCTTAAGGCCATACTGGCTTTTATTGAGGTATCTGTTCCACCTGAAGCATTTCAATCAATTTGGACAGAAGATATTAGGAGGCTTTGGGGTGTGAAGTTGAACAGATCTTCTTCTGTTGAGGAACTTCTACAGATATTGACTTTATTTGAGAGAGCACTAAAGCGAGATTTTTTATCATCATCCTTTTCTACAACTGGGGATTTGTTGGGGATGAGCACTATGTCGCAGAGTGCTGCACATACTTCCATGGATCTTGAATCAGTTCCTGTTCTTCCATGGGTTCCGCGGACCACTTCAGCTGTGTCTCTCAGACTTTTTGAGTTTGACACATCCATCGCTTACGTTAAGCCAGAGAAACCTGAGCTGTATGAGGAGAAAGAAGCTAGATACATAAAGCTTCCTTCAAGATATGCCTCTGTCAAATCTACTAAAGTGGTTGAGCCAGCAGACTTGGATCGTGATGAATTAATGAAAGTGAAATCTGCCCCTATTGTGCGCAGCAGCAAAAAACGGGGACGAGTGAATCATGATAAAGGAAGGGCTAAAAAGCTGTCTAGAAGAACAAATGATTCCAAACGAGATAATGTCCACCACAATTTTATGGTCACTGATAATCTAAGTCAAAGAATAAAACAGCAGGGACAAGGATCACAAGGACAAGCAGGTGGACGTGGCCCTCGGACAGTTAGGAAAAGGAGAGCGGAGAAGAGGGTTGTTGAAGATTTTTTGTTGGATGATAGGGCTGCCAATCATAATATTGGTAGAGAATCATCAAGAATCTTGGATGGGGACTGGAATGATGAGAAGACAGGTCCCATCCATATGGAAGATGCTGACATGAGTAGCAGCAGTGAAGAGGTTGAATATGATGACAACGCCCAGGCAGTAGAATCTGATGACAATGTCGAAGCAGTAGAGTATGGTCAAGGGAACTGGGAGATAGGTTTTAATGGTACCCCCAACAGATGGAATAGGGATTTGGTTGGAATGAGCGATGAAGATGCGGAAGCTTCTGAAGATGACAATAACAATGGCATTGAAGAGAATGAAgtggaagaggaagaggaagaggaggagGGTTCTGAAGCAGATGTTATGAGCGAGGGTTCAGCTGGTATGGCCAATAATAGAGTTGTAAATGAAGAAAGCTCAGACTCGAGCGACTCCGAAGATTCTTCCGATTAG | 4548 | 0.4039 | MARTSQEYQYLPNQSGIKSDAFGQFGQSHLHTPKEGPSRNSPLPRIHATKGHSSRVSLLSQQDKKGSPYRSPPGDDDVVPTQELYTNMANVGMNSHQTDSQTGGSENPYASPSGQILQNNATHNERKRKGDDGKIPRDVEANEMRIQKELEKQDNLRRKNEERIRKEMERQDRERKKEEERLMRERQREEERTKREEKREIERREKYLLRENLKAERMRQKEELRKEKEAERRKAALEKAHARKIAKESMELIEDEQLEMMELAASSKGLSSIIRLDFDTLQNIESFRGSLCVFPPENVKLRKPFAIQPWFNSEENVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVAILKVIIKDIEDVARTPVTGLGMNQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNQLTWPEIFRQLALSAGYGPQFKKRSITSSRANTKDEGRSCEDTISALRNGSAAENAVAKMQERGLLGPRRSRHRLTPGTVKFAAFHVLSLESGEGLNVIELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERVAPSTYCVRAAFRKDPADAESILSEARKKIQIFENGFLAEEDADDGEREESESEVDEDPEVDDLVNPSSVNKTSEHCNDFSSSGKENLGHDAELKDEFDKDLPCYPDNGSKSADRPRAVSGQPVACENLNARNLGEDNMEIDESKSGESWIQGLTEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMLAEGQIDKIRLKDDNVIKSDFPAIKVETQPTCAAVEGNQSPLLDINSCNNNNNNEESPSKTENKRLALVGQNLSEKLSSSQDLCIGPDSSQTLLSAQYSKRSRSQLKSYISHLAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSEEAFDALLNSLDSRGIRESHLRLMLLKIENIFKENVQKNAKCAKIGNTDEIRVKNEADETDSSPDNHTRSDSPSSTLCGLSSDTSEASSSFRIELGKSESDKKAALGRYQDFQKWLWKECYNPSILCAMKYGKKRCKPQVDICDTCLDLYCLEDSHCSYCHRTFPPNDGFNFSKHAFECGDKLPKNICILDSSLPLRTKLLKAILAFIEVSVPPEAFQSIWTEDIRRLWGVKLNRSSSVEELLQILTLFERALKRDFLSSSFSTTGDLLGMSTMSQSAAHTSMDLESVPVLPWVPRTTSAVSLRLFEFDTSIAYVKPEKPELYEEKEARYIKLPSRYASVKSTKVVEPADLDRDELMKVKSAPIVRSSKKRGRVNHDKGRAKKLSRRTNDSKRDNVHHNFMVTDNLSQRIKQQGQGSQGQAGGRGPRTVRKRRAEKRVVEDFLLDDRAANHNIGRESSRILDGDWNDEKTGPIHMEDADMSSSSEEVEYDDNAQAVESDDNVEAVEYGQGNWEIGFNGTPNRWNRDLVGMSDEDAEASEDDNNNGIEENEVEEEEEEEEGSEADVMSEGSAGMANNRVVNEESSDSSDSEDSSD | 1515 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 1 | 200 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 1287 | 1303 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 1330 | 1355 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 1380 | 1515 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 620 | 639 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 53 | 67 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 988 | 1005 | - | - | |
| Tsu02g01979 | 1515 | MobiDBLite | consensus disorder prediction | 83 | 121 | - | - | |
| Tsu02g01979 | 1515 | ProSiteProfiles | HARE-type HTH domain profile. | 496 | 565 | IPR007759 | GO:0006355 | |
| Tsu02g01979 | 1515 | Coils | Coil | 1458 | 1485 | - | - |
Showing 1 to 10 of 31 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu02g01979 | - | - | gmx:100818817 | 1987.23 |
Showing 1 to 1 of 1 entries
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu02g01979 | 02 | 19093495 | 19103661 | Tsu02g01979 | 02 | 19093495 | 19103661 | ECH | |
| Tsu02g01979 | 02 | 19093495 | 19103661 | Tsu08g04037 | 08 | 58615834 | 58624555 | PCT |
Showing 1 to 2 of 2 entries