Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01946 ATGGAAATTGATGGATCTAAAGAAATCTTTCTTGGTCAAGTTGTGAATAATAAGGATGAGGCATACAACTTGTATCAAGAACATGCtttcaaaatgagttttagtgtACGTAAGGGGAGGGAGTTATATTATGATAATGAGAAGAAACAAACACGCTTAAAAGAATTTTATTGTTCTAAACAAGGGTTTAAGAACAACAAACTCGAAGGTGAAGTGGCTTATGAGAGAGCAGATTCAAGAACAAATTGTAATGCTATGGTGCGATTTAATGTGAGCAAGGAAGGTCTATATAAAATAACCCAGTTGGTATTGGATCACAATCATGAGTTTGTACCTCCTGAGCAAAGACATATGCTACGTTCTATGAGAAACTTGTCAAATGTCAAAGGTGGTCTCATAAAGTCCATGGTGAATGCTGGTATGAAAGTTACAAATATTTGGAGTTATCTTGGTGAAGAAGTTGGAGGATTTAATAATCTTGGTATAACTTTGAAAGATATGCACAATTATGTCTACACAGAAAAGTTGAAGTCAATTGAAGCCGGTGATGCTCAAGCTTTAGTTAACCATTTACAAAATAGGCAAGCACAAGATGTCATATCTGGGTTGGTGGGTCGTGTAGGTTCCTTGCCTATTTGGGTTAAGGATTCTCTGCTTGTCTCCACCGTGTTAGAAGGGTTGGATTGGGGTGATTTTAGATCTGTGGCCTCGCTTTGCGCTATGGTTGATCAATTGAGATCTGCAGGTTTGCCTCCACTTCGGTATCCGGTGCTTATCTGTCTCAGTCCCTGTGACTGTTCTCCGACTCTTATGTTCAAAAGAGCTTTTATGCTTGTTGATTTGTTCAGGGAGTTGTTGGTACGTGGTTCTGGATTTTGTATTGGCGGTTGCTCCATTCGCCAGTTTGAATCATATTTTTGTGTTGATATTGTGCTTGTTTGTAAGGATTAA 951 0.3796 MEIDGSKEIFLGQVVNNKDEAYNLYQEHAFKMSFSVRKGRELYYDNEKKQTRLKEFYCSKQGFKNNKLEGEVAYERADSRTNCNAMVRFNVSKEGLYKITQLVLDHNHEFVPPEQRHMLRSMRNLSNVKGGLIKSMVNAGMKVTNIWSYLGEEVGGFNNLGITLKDMHNYVYTEKLKSIEAGDAQALVNHLQNRQAQDVISGLVGRVGSLPIWVKDSLLVSTVLEGLDWGDFRSVASLCAMVDQLRSAGLPPLRYPVLICLSPCDCSPTLMFKRAFMLVDLFRELLVRGSGFCIGGCSIRQFESYFCVDIVLVCKD 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01946 316 Pfam FAR1 DNA-binding domain 24 112 IPR004330 -
Tsu02g01946 316 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 8 198 IPR031052 GO:0006355
Tsu02g01946 316 PANTHER OS12G0160900 PROTEIN 8 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01946 Tsu-Chr2 18428630 18438789 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tsu02g01946 FAR1 7.7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01946 - - mtr:MTR_6g051425 320.472