Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01932 ATGGATGAAAGTAGTAATTCTTGGATAAGGAGGACAAAATTCTCTCATACAGTTTGTCACCGATTGGATTATTCGAGAATAGGTTCTTTCATTATTCAGCCTGATGTAGTTCCGAATTCAGGTCTGAAATCAAGGGCAGTATCATCAGCGTCGGCAACAGCAATAGCAGCGTCAGGACCTCCTGTTGTTTCTAAGGTAACAAAAGTTCAGAAGCATCCTTTAACAAATAAGCTGAGATCTTTGTCTCCTTTGCCTGAGAGCTCTCTCTCTGAAACCTTTAAGGAAGCTAAGGATGAACAGAAGAGGTTTTCAACTCCTGGTCCAAGGAGAAAGGAGCAGGATACAAGAATCATGGGGAAGCTACTGAACAAGGATTCTCAAGTGTCCAAGTTTAAATTTCCTCATAAAAGTCCAACTAAGCACCTTGCATCGATGAAAATCAGTGACAAGTCGAAGAACCGCAAGGACTCGGGATGGACAAAGTATTTTGACCACGGTGCAGGAAAGGTTACTGCTGTCGAAACGGCCGAGGAATGGAATGTTGACCTATCTAAGCTCTTTGTTGGTCTTAGGTTTGCTTATGGGGCTAACAGTAGGCTTTACCATGGTATGTATGAGGATGCACCTGTTGCTGTGAAAATTATTAGGGTACcagatgatgatgaaaatggaaTGCTGGCTGCTAGATTAGAGAAACAATTCATCATAGAAGTCACACTTTTATCTCGCCTCCACCATCAAAATGTTCTCAAGTTCGTAGCAGCATGCAGAAAGCCACCTGTTTATTGTGTTATCACAGAATATCTATCGGAAGGTTCCTTGAGGGCATATTTGCATAAGTTGGAGGGGAAACCCATTTCTCTACAGAAGCTAATTGCTTTTTCTCTGGATATTGCTCATGGAATGCAATATATACACTCTCAAGGTGTCATTCATCGAGACCTTAAACCAGAGAATGTTCTTATTAATGAAGACTTTCACCTTAAAATTGCTGATTTTGGCATTGCTTGTGAGGAAAAATACTGTGACTTACTTGCTGATGACCCTGGTACCTACCGCTGGATGGCACCTGAGATGATCAAACGGAAATCCTATGGGAGAAAAGTTGATGTGTATAGTTTTGGCCTTATCTTATGGGAAATGCTTACCGCTACAATACCATATGAGGATATGACTCCCATCCAGGCTGCTTTTGCTGTTGTAAATAAGAATTCAAGACCTGTTATTCCTTCAAACTGCCCACCTGCTATGCGAGCTTTAATCGAGCAATGTTGGTCCTTGCATCCAGATAAAAGGCCTGAGTTTTGGCAGATTGTTAAAGTATTAGAGCAATTTAAATCTTCGCTTGCTCGTGATGGAACATTGACTCTGCAGCAAAACCCTTGTGGCCATGATCATAAAAAGGGACTTCTTCATTGGATTCACAAGCTTGGTCCTCAACATCATAGTGGTCCTGTGCCTAAACCAAAATTTACATGA 1479 0.4097 MDESSNSWIRRTKFSHTVCHRLDYSRIGSFIIQPDVVPNSGLKSRAVSSASATAIAASGPPVVSKVTKVQKHPLTNKLRSLSPLPESSLSETFKEAKDEQKRFSTPGPRRKEQDTRIMGKLLNKDSQVSKFKFPHKSPTKHLASMKISDKSKNRKDSGWTKYFDHGAGKVTAVETAEEWNVDLSKLFVGLRFAYGANSRLYHGMYEDAPVAVKIIRVPDDDENGMLAARLEKQFIIEVTLLSRLHHQNVLKFVAACRKPPVYCVITEYLSEGSLRAYLHKLEGKPISLQKLIAFSLDIAHGMQYIHSQGVIHRDLKPENVLINEDFHLKIADFGIACEEKYCDLLADDPGTYRWMAPEMIKRKSYGRKVDVYSFGLILWEMLTATIPYEDMTPIQAAFAVVNKNSRPVIPSNCPPAMRALIEQCWSLHPDKRPEFWQIVKVLEQFKSSLARDGTLTLQQNPCGHDHKKGLLHWIHKLGPQHHSGPVPKPKFT 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01932 492 CDD STKc_MAP3K-like 195 442 - -
Tsu02g01932 492 SUPERFAMILY Protein kinase-like (PK-like) 171 442 IPR011009 -
Tsu02g01932 492 Pfam Protein tyrosine and serine/threonine kinase 195 442 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 3 469 - -
Tsu02g01932 492 Gene3D Transferase(Phosphotransferase) domain 1 271 469 - -
Tsu02g01932 492 SMART serkin_6 186 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01932 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Tsu02g01932 492 MobiDBLite consensus disorder prediction 91 113 - -
Tsu02g01932 492 ProSiteProfiles Protein kinase domain profile. 186 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu02g01932 492 Gene3D Phosphorylase Kinase; domain 1 174 270 - -
Tsu02g01932 492 MobiDBLite consensus disorder prediction 78 113 - -
Tsu02g01932 492 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PRINTS Tyrosine kinase catalytic domain signature 304 322 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PRINTS Tyrosine kinase catalytic domain signature 350 360 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PRINTS Tyrosine kinase catalytic domain signature 369 391 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PRINTS Tyrosine kinase catalytic domain signature 413 435 IPR001245 GO:0004672|GO:0006468
Tsu02g01932 492 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01932 Tsu-Chr2 18213691 18217372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01932 1 492 MAP Kinase Kinase Kinase AT5G58950 57.170 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu02g01932 PK_Tyr_Ser-Thr 4.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01932 - - gmx:100784454 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g01932 02 18213691 18217372 Tsu08g04080 08 59009651 59013684 PCT