Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01929 ATGGATACTCTTGCCTCAAAGAAGAGAGCAAACACCAATCAACAACCACCACTTGTCATTGTTCACAAAAGACAGAGAGTTGTTTTGTGTGAAATTCCTGATCTCAGTTTCCCCCAATATCAACCCAAACACAAACTCCAAGTTCAGAGAAACCCTAACATCAACAATTCCCTTGAAGAGATTGATGAGCCTTATGTATCCGACATTGTGGATTATCTTCGCACAATGGAGATGTCGAAAAAGAGAAGGCCAATGGTTGGTTATATGGAGAATGTTCAAACAGACATTACTTCAAACATGAGGGGGACATTGGTTGATTGGTTAACGGAGGTTGCGGACGAGCACCAACTTCTTCCTGAAACCCTTCATCTATCTATTTCCTACATCGATCGGTTCCTATCTATTCAACATGTTAAAAGATCCAACTTTCAACTGCTCGGCGTTTCCTCCATGCTCATTGCATCAAAGTATGAAGAAATCACCCCACCAAAGCCGGTGGATTTCTGCCAAATTACCGATAACACCTATGATCTAGAAGAGGTTTTAAAGATGGAATCTAACATACTCAATACTCTAAATTTTGAAATGGGAAACCCTAATGTCATCACATTTCTAAAGAGGTTTATTGGGATTGCTTCTGAGAATCCAAAGACTTGTAATTTGCAATTTGAGTATTTGTGCAACTATCTCGCTGAGTTAAGTTTGTTGGACTATGAGTGTATAAGATTCTTGCCTTCTGTTGTGGCTGCATCCGTTATATTTCTTGCCAGATTTATTATCCGGCCTGGAGTAAATCCATGGACTTCATCCCTGTGTGAATGCTTGGGATATGAATCGGCTCATTTGGAAGAATGTGTTACCGTGTTACACGACTTGTATATGTCAAGAAGGGCAGCATCGTTCAAAGCTGTTCGCGACAAATACAAGCAGAACAAGTTCAAATGTGTGGCAAACTTGCCTTCCCCTCCTGAGGTTCCAAATCATTATTACTTAATCTATTGCTGCCAAATATAA 1014 0.4014 MDTLASKKRANTNQQPPLVIVHKRQRVVLCEIPDLSFPQYQPKHKLQVQRNPNINNSLEEIDEPYVSDIVDYLRTMEMSKKRRPMVGYMENVQTDITSNMRGTLVDWLTEVADEHQLLPETLHLSISYIDRFLSIQHVKRSNFQLLGVSSMLIASKYEEITPPKPVDFCQITDNTYDLEEVLKMESNILNTLNFEMGNPNVITFLKRFIGIASENPKTCNLQFEYLCNYLAELSLLDYECIRFLPSVVAASVIFLARFIIRPGVNPWTSSLCECLGYESAHLEECVTVLHDLYMSRRAASFKAVRDKYKQNKFKCVANLPSPPEVPNHYYLIYCCQI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01929 337 Gene3D - 82 197 - -
Tsu02g01929 337 CDD CYCLIN 100 189 IPR013763 -
Tsu02g01929 337 SUPERFAMILY Cyclin-like 199 323 IPR036915 -
Tsu02g01929 337 CDD CYCLIN 199 290 IPR013763 -
Tsu02g01929 337 Pfam Cyclin, N-terminal domain 68 196 IPR006671 -
Tsu02g01929 337 SMART cyclin_7 203 291 IPR013763 -
Tsu02g01929 337 SMART cyclin_7 106 190 IPR013763 -
Tsu02g01929 337 SMART Cyclin_C_2 199 322 IPR004367 -
Tsu02g01929 337 PANTHER CYCLIN-A3-1-RELATED 60 330 - -
Tsu02g01929 337 Gene3D - 68 318 - -
Tsu02g01929 337 PANTHER CYCLINS 60 330 IPR039361 -
Tsu02g01929 337 Pfam Cyclin, C-terminal domain 199 321 IPR004367 -
Tsu02g01929 337 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Tsu02g01929 337 ProSitePatterns Cyclins signature. 101 132 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01929 Tsu-Chr2 18187675 18188688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01929 1 326 Core Cell Cycle Gene Families AT5G43080 49.853 3.89e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01929 K06627 - gmx:100786875 407.527