Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01924 ATGTGTATTCGAATCATAGGAGCTAGTAATCGACGGTATGCTTATATTGGTGACATTGTTGTTGCTGTAATCAAAAAAGCCGTACCAAATTCATCTGTAGAAAGATCAGAAGTGATCAGAGCTGTAATTGTACGTACTTGTAAAGAACTCAAACGTAGTAATGgtataataataaagtatgatGATAATGCGGCGGTTCTCGTTGATAAAGAAGGAAATCCCAAAGGAACTCGAATTTTTTCCGCAATAGCCCGAGAATTGAGACAGTTAAATTTCACTAAAATAGTTTCATTAGCACCTGAGGTATTATAA 312 0.3429 MCIRIIGASNRRYAYIGDIVVAVIKKAVPNSSVERSEVIRAVIVRTCKELKRSNGIIIKYDDNAAVLVDKEGNPKGTRIFSAIARELRQLNFTKIVSLAPEVL 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01924 103 Pfam Ribosomal protein L14p/L23e 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 SMART Ribosomal_L14_2 1 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 PANTHER 50S RIBOSOMAL PROTEIN L14, CHLOROPLASTIC 1 101 - -
Tsu02g01924 103 TIGRFAM rplN_bact: ribosomal protein uL14 1 103 IPR005745 GO:0003735|GO:0006412|GO:0015934
Tsu02g01924 103 Hamap 50S ribosomal protein L14 [rplN]. 4 103 IPR000218 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 SUPERFAMILY Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 Gene3D Ribosomal protein L14 1 103 IPR036853 GO:0003735|GO:0005840|GO:0006412
Tsu02g01924 103 ProSitePatterns Ribosomal protein L14 signature. 41 67 IPR019972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01924 Tsu-Chr2 18107425 18107736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01924 14 99 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 38.372 7.03e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01924 K02874 - gmx:3989333 186.037