Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01896 ATGAATTGTCATTCAGATTTGAAGAATTGGAAGGATTGTAGTTCTCTGTCTACCAAAGATTTGAAAAATGACAAATGTTTAAAGAGCCTAACCTTGCTTCTTAAGTGCCTGAAGATAATGGAAAATGCTACTTTCCTAAGCAAAGACAATCAGACTCATTTGCTTGGAATGAAAGGAAAATTGAGTCCCAAGGCAACCCCATTGTCTTTTACGGAGATTATTATAATTGTCATAAAGATGCTCTCAGATCTATGTTTGCGTCGGAGTGCCTCTGCTGTGTCCATTGTTAACAAGCTTAATGATCCTTTTTCTATGGTCAGTGATGATTCTGAATTGGATCAGCTCAGATATAAAGAGAATAAACCTGTATCCATTAGTTCCAATGGGAATTACTATGGTGTGGAGAGGGCATCTTCTATTAAGAATTCTAATGTTTCTCATAAAACCCAACTGTTGACATGTGCTCGGTTAGAAAGATCACTCTCCGTTTCTGAAACTCCCAGCACATCAACTACTGATACGTACGCACTAAAGATGAGGATCAATTCATCCACATCTGGGTCTTGCAGTGGTTTGTCAAAGAGTTCAAACAGTAAAAAATCCATGACCCAAAATAGTTCCAGGAAGAATGTTCACTTTACTGAAGGTTCCTCGGTTATAGTCTTGGATGATAGTCCAGACCCCTTTGCATTTGATGAGGATGACAGTGGTTTATCAAAGAGTTCGTACTGTAAAAAATCCATGACTCAAAATAGTTCCAGGAAGAATAGCCAACAAGATCCATTTGCATTTGATGAGGAAGACAGTGGTTTATCAAAGAGTTCGTACTGTAAAAATTCCATGACCCTAAATAGTTCCAGGAAAAATGTTCAGTTTACAGAACGTACCCCAATTGTAATCTTGGAAGATAGCCAAGATCCCTATGCATTTGATGAGGATGACATTGCACCCTCTAAGTGGGACCTACTATCGGGGAAGGGCAAACAAAAAACATCTAATCCTAAAAAACATAAGGTTACaaatagagaatttgaaaatgaacggCAATCGCAAACCAAAATGAGTCAAGAAGAATCAAGTGAGGGGAACATCAATTGTTCTAGTTCAGACATAAGTTATGAAGAAGATTCCAGCCTTCTAACCGATTGCCTCCTTACTGCTGTTAAGGTGCTTATGAATTTGACTAACGACAACCCTATTGGCTGTCAACTAATTGCTGCCAATGGAGGACTGGAGGCTATGTCCATGTTAATTGCGGGCCATTTCCCTTCTTtcagttcatcatcatcctttgctcagataaaagaaaattctttGAGAACTGAAAAGGACCATCTATGTGATAGGCATCTAACTGATAATGAGTTGGATTTTCTTGTTGCTATTTTGGGCTTGCTTGTGAATCTGGTTGAGAAGGATGGTCGTAACAGATCACGGCTTGCAGCAGCCAGTGTCCTATTACCTTCTACAGAAGGCTTGGATCAGGAGGTTCGGCGGGATGTTATTCAATTATTATGCTCTATATTCTTGGCTAACCAGGGTGAAAGTGAGGTGGGAGCTGGGGAAGATAAAAAATTTGAACTGACTGATGAGGCGGCTGTTCTACAAGGTGAAAAGGAAGCTGAGAAAATGATCGTGGAAGCTTACTCTGCGTTGCTTCTAGCATTTCTTTCCACGGAAAGTAAGAGCATCCGTGCGGCAATTGCTGACAATCTTCCAGATCACAACTTAGCAAGTCTTGTACCTGTGTTGGACAGATTTGTGGAATTTCATCTGTCTTTGGACATGATTTCTCCAGAGACTCATAAAACTGTTAGCGAGGTCATTGAATCATGTAGAATTCGCAATTCTGTCACTACAAGAAACCCACCACCTTCACCTCCAAGATTACCTCTACTTGGTAATCTCCATCAACTTGGCTTATTCCCTCACCGATCGCTCCAAACTTTAGCTCACAAAGATGGCCCTTTAATGCTTCTTTATCTTGGGAAGGTACCAGTGATTATAGTTTCCTCTGCTGATGCAGCAAGTAAGGTAATGAAAACTCATGACTTGGTTTTCTCTGATAGACCACAACGTAAAATCTTTGATATCATGTTGTATGGTTCCAAAGATGTGGCAAGTTGTGCATATGGTGAGTATTGGAGACAAGTAAGGAGTCTTAGTGTGTTACACCTTTTGAGTAACAAAAGAGTTCAATCTTATCGTTGTGTGAGAGAGGAAGAAACTGCAAAAATGATGCAAATTATTCAAGAGAAGAACTCTTCTGTGAATTTATCTGAGTTGTGTTCTACAATTACTAATGATATAACATGTAGGGTGGCTCTAGGAAAGAGATATAGTGAAGAAGGTGGAGTGTTTCCTGAACTTATGTTGGAGTTTGGTGAATTATTAGGTACTTTCTTTATAGGAGATTATATACCTTGGCTTAATTGGTTGGGAAAGGTTAATGGTTTTTATAGCAAGGCAGAAAAAGTGGCTAAACATTTGGAtgaattttttgacaaagtaaTTGAGGAGCACATTAGTGGTAAAAGATCTGATGGACATGTTGGTGAGGAAAGCAATGATTTTGTGGACATTTTGCTTTCAGTTCAAAAGAGCAATGCTGCTGGCTTCTCAATTGATAGAACTGCAATTAAGGGTTTGTTACTGGACATGTTTGCTGGAGGTACTGATACTACTTACACAGTCCTAGAATGGGCGATGGCAGAACTGCTCAGAAACGAAACTGTTATGCGGAAATTGCAAGATGAAGTGAGAACTGTGGTTGGCAACAGAACTCATGTAACTGAAGAGGATTTGGTTAACATGAACTATTTGAAATATGTGATTAAGGAAACCCTTCGCCTCCATGTACCAATAACGTTATTGGTCCCTCGGAAATCAATGGAAGATGTCAAACTAAATGGCTATGACATTACAGCTGGAACACAGGTAATTATCAATGCTTGGGCTATTGCAAGAGATCCTTCAAGTTGGGATGAACCTTTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTTCAAAGGATTGAATTTTGAACTTATCCCATTTGGATCAGGAAGGAGGGGTTGTCCTGGAATGTTGTTTGCTATTGCTGTGAATGAATTGGTGCTAGCAAATCTTGTTTACCAATTTGATTGGAGATTGCCTGATGGAGTAGCAGGGAAGGATTTGGACATGTCTGAGACTGTTGGCATAACCTGTCATAGAAAATACCCTCTCCTTGTAGTAGCTACCAAATATCAGAAAAATTAA 3270 0.385 MNCHSDLKNWKDCSSLSTKDLKNDKCLKSLTLLLKCLKIMENATFLSKDNQTHLLGMKGKLSPKATPLSFTEIIIIVIKMLSDLCLRRSASAVSIVNKLNDPFSMVSDDSELDQLRYKENKPVSISSNGNYYGVERASSIKNSNVSHKTQLLTCARLERSLSVSETPSTSTTDTYALKMRINSSTSGSCSGLSKSSNSKKSMTQNSSRKNVHFTEGSSVIVLDDSPDPFAFDEDDSGLSKSSYCKKSMTQNSSRKNSQQDPFAFDEEDSGLSKSSYCKNSMTLNSSRKNVQFTERTPIVILEDSQDPYAFDEDDIAPSKWDLLSGKGKQKTSNPKKHKVTNREFENERQSQTKMSQEESSEGNINCSSSDISYEEDSSLLTDCLLTAVKVLMNLTNDNPIGCQLIAANGGLEAMSMLIAGHFPSFSSSSSFAQIKENSLRTEKDHLCDRHLTDNELDFLVAILGLLVNLVEKDGRNRSRLAAASVLLPSTEGLDQEVRRDVIQLLCSIFLANQGESEVGAGEDKKFELTDEAAVLQGEKEAEKMIVEAYSALLLAFLSTESKSIRAAIADNLPDHNLASLVPVLDRFVEFHLSLDMISPETHKTVSEVIESCRIRNSVTTRNPPPSPPRLPLLGNLHQLGLFPHRSLQTLAHKDGPLMLLYLGKVPVIIVSSADAASKVMKTHDLVFSDRPQRKIFDIMLYGSKDVASCAYGEYWRQVRSLSVLHLLSNKRVQSYRCVREEETAKMMQIIQEKNSSVNLSELCSTITNDITCRVALGKRYSEEGGVFPELMLEFGELLGTFFIGDYIPWLNWLGKVNGFYSKAEKVAKHLDEFFDKVIEEHISGKRSDGHVGEESNDFVDILLSVQKSNAAGFSIDRTAIKGLLLDMFAGGTDTTYTVLEWAMAELLRNETVMRKLQDEVRTVVGNRTHVTEEDLVNMNYLKYVIKETLRLHVPITLLVPRKSMEDVKLNGYDITAGTQVIINAWAIARDPSSWDEPLEFKPERFMNSSIDFKGLNFELIPFGSGRRGCPGMLFAIAVNELVLANLVYQFDWRLPDGVAGKDLDMSETVGITCHRKYPLLVVATKYQKN 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01896 1089 PANTHER CYTOCHROME P450 FAMILY PROTEIN 614 1087 - -
Tsu02g01896 1089 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1022 1031 IPR017972 GO:0005506|GO:0016705
Tsu02g01896 1089 PRINTS E-class P450 group I signature 651 670 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 879 896 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 1029 1052 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 1019 1029 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 675 696 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 942 960 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 983 1007 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 766 784 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS E-class P450 group I signature 899 925 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 MobiDBLite consensus disorder prediction 336 354 - -
Tsu02g01896 1089 Pfam Cytochrome P450 624 1072 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 MobiDBLite consensus disorder prediction 231 270 - -
Tsu02g01896 1089 SUPERFAMILY Cytochrome P450 624 1084 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 MobiDBLite consensus disorder prediction 241 259 - -
Tsu02g01896 1089 PRINTS P450 superfamily signature 890 907 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS P450 superfamily signature 943 954 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 PRINTS P450 superfamily signature 1020 1029 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 MobiDBLite consensus disorder prediction 321 365 - -
Tsu02g01896 1089 Pfam Wings apart-like protein regulation of heterochromatin 17 475 IPR022771 -
Tsu02g01896 1089 Gene3D Cytochrome P450 615 1088 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01896 1089 SUPERFAMILY ARM repeat 382 570 IPR016024 -
Tsu02g01896 1089 MobiDBLite consensus disorder prediction 184 210 - -
Tsu02g01896 1089 Gene3D - 1 116 IPR011989 -
Tsu02g01896 1089 Gene3D - 335 614 IPR011989 -
Tsu02g01896 1089 PANTHER CYTOCHROME P450 71B11-RELATED 614 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01896 Tsu-Chr2 17735602 17751219 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01896 621 1084 Cytochrome P450 AT3G48270 51.502 1.12e-174 519
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01896 - - gmx:100819183 654.825