Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01894 ATGCTTCTATATTTTGGGAAGGTTCCAGTACTTGTGGTTTCTTCTGCTGAAACTGCTTGTAAAGTAATGAAAACTCATGACTTGGTTTTCTGTGATAGGCCACATAGTAAAGTCTTTGATATCCTTTTATATGGTTCGAAAGATGTTGCAAGTTGTGCATATGGTGAATATTGGAGACAGGTAAGGAGTCTTTGTGTGTTACACCTTCTGAGTGTTCGATCTTATCGTCATGTGAGAGAGGAAGAAACTTTAAGAATGATGGAATATATTAAGGAGAGTTGTTCTTCTGCTTCGCCGTTGAATTTAACTGAGTTGTGTTCTACAATTACTAATGATATAATATGTAGGGTGGCTTTTGGAAAAAGATACCGTGAAGGAAAAGGGAACAAATTTCAGGAAGTTTTGTTGGAGTTTGGGGAGTTATTGGCCACTATATGTATAGGAGACTATATACCTTGGCTTGATTGGTTGGGGAAAGTTAATGGTTTTAATAAAAGGGCAGAAAAATGTGCCAAATATTTAGATGAGTTCATAGAAGAAGTTATTGACGAGCACATTAATCGTAGGTCTGATGGAGATGTTAGTGTTGATAGTGAGGATCATAATGATTTTGTGGATGTTTTGCTTTCTGTTCAAAAGACTAATGCTATTGGCTTCCCAATTGAGAGAACTTCAATAAAAGCTTTAATACTAGACATGTTTGCTGCAGGTACGGACACTACCTACACAGTCCTAGAATGGGCATTGACAGAACTGCTAAGACACCAAACTGTAATGCATAAATTGCAAGATGAGGTCAGAACTGTCGTTGGCAACAAAACTCATGTAACTGAAGAAGATTTGGTTAACATGAACTATTTGAAAGCTGTGATTAAAGAAACCCTTCGCCTCCACGTCCCAATTCCGTTATTAGTTCCTCGGAAATGTATGGAAGATATCAAATTAGATGGTTATGACATTGCAGCTGGAACAAATGTAATTATCAATGCTTGGGCTATTGCTAGAGATCCTTCAAGCTGGGATGAACCTTTAGAGTTTAAACCAGAAAGGTTTTTGAACAGTTCAATAGATTTTAAAGGATTTGACTTTGAACTTATCCCATTTGGAGCAGGAAGGAGGGGTTGTCCTGGATTTTTGTTTGCCATTGCTGTGAATGAATTGGTGTTAGCAAATCTTGTTTACCATTTTGATTGGAAATTGCCTGATGGAGTAGCAGCCAGCAGGGAAGGATTTGGACGTGTCGGAGACTGGTGGCCTTGCTTGTCATAG 1269 0.3822 MLLYFGKVPVLVVSSAETACKVMKTHDLVFCDRPHSKVFDILLYGSKDVASCAYGEYWRQVRSLCVLHLLSVRSYRHVREEETLRMMEYIKESCSSASPLNLTELCSTITNDIICRVAFGKRYREGKGNKFQEVLLEFGELLATICIGDYIPWLDWLGKVNGFNKRAEKCAKYLDEFIEEVIDEHINRRSDGDVSVDSEDHNDFVDVLLSVQKTNAIGFPIERTSIKALILDMFAAGTDTTYTVLEWALTELLRHQTVMHKLQDEVRTVVGNKTHVTEEDLVNMNYLKAVIKETLRLHVPIPLLVPRKCMEDIKLDGYDIAAGTNVIINAWAIARDPSSWDEPLEFKPERFLNSSIDFKGFDFELIPFGAGRRGCPGFLFAIAVNELVLANLVYHFDWKLPDGVAASREGFGRVGDWWPCLS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01894 422 PRINTS E-class P450 group I signature 225 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 365 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 109 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 245 271 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 375 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS E-class P450 group I signature 329 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 368 377 IPR017972 GO:0005506|GO:0016705
Tsu02g01894 422 Gene3D Cytochrome P450 1 411 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 405 - -
Tsu02g01894 422 Pfam Cytochrome P450 3 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PANTHER CYTOCHROME P450 71B11-RELATED 1 405 - -
Tsu02g01894 422 PRINTS P450 superfamily signature 236 253 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 PRINTS P450 superfamily signature 366 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01894 422 SUPERFAMILY Cytochrome P450 2 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01894 Tsu-Chr2 17717186 17718554 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01894 1 400 Cytochrome P450 AT3G48270 52.228 6.11e-152 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01894 - - gmx:100819183 587.415