Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01893 ATGTCCATATTTCTACAAAGTTCTCTTTCACATGAAATATTCACTTTATTCCCTATGCTTTTCTTCACTATCTTTCCACTATTCCTTTCtcttttcttcatcatcaaatgGTATTTCAACAATTCTGTCACCACAAGAAACTCACCACCTTCACCTCCAAGATTTCCTCTGTTTGGTAATCTCCATCAACTTGGCATATTGCCACACCGGTCACTCcaaaatttatcaaacaaatatgGACCTTTAATGCTTCTTTATTTTGGCAAGGTTCCGGTACTTGTGGTTTCTTCTGCTGATGCAGCTAGTAAAGTAATGAAAACTCATGACTTGGTTTTATCTGATAGGCCACATTGTAAAATCTTTGATATCCTTTTATATGGTTCGAAAGATGTGGCAAGTTGTGCATATGGTGAGTATTGGAGACAAATAAGGAGTCTCAGTGTGATACACCTTCTGAGTAACAAAAGGGTTCGATCTTATCATCATGTAAGAGAGGAAGAAACTTTAAGAATGATGGAATTTATTAAGGAGTGTTGTTCTTCTGCATCGCCGTTGAATTTAACTGAGCTGTGTTCTAAAATTACTAATGATATAGTCTGTAGGGTCGCTTTAGGAAGAAGATACCGTGAAGGAAAAGGGAACAAATTTCAGGAAGTTTTGTCTGAGTTTTGGGAGTTATTGGGCACTGTATGTATAGGAGACTATATACCTTGGCTTGACTGGTTGGGGAAAGTTAATGGTTTGTATAGCAGGGCAGAAAAATGTGCCAAATATTTGGATGAGTTCTTAGAAGAAGTTATTGAGGAGCACATTAGTCGTAGGTCTGATGGAGATGTTAGTGTTGATAATGAGGAGCAGGGTGATTTTGTGGATGTTTTGCTGTCTGTTCAAAAGACTAATGCTATTGGCTTCCCAATTGAGAGAACTTCAATAAAAGCTTTAATACTAGACATGTTTGCTGCAGGTACAGACACTACCTACACAGTCCTAGAATGGGCACTGTCAGAACTATTAAGACACCAGACAGTGATGCATAAATTGCAAGATGAGGTTAGAACTGTGGTTGGTAACAGAACTCATGTAACTGAGGAGGATTTGGTTAACATGAACTACTTAAAGGCTGTGATCAAAGAAACTCTTCGCCTGCACATCCCGGTTCCCTTATTAGTCCCTCGGAGAACTATGGAAGACATCAAACTAGATGGCTATGACATAGCAGCTGGTTCATGGGTAATAGTGAATGCTTGGGCAATTGCAAGAGACCCTTCAATTTGGGAAAAACCTCTAGAGTTTAAACCAGAAAGGTTTATGAATAGTTCAATAGATTATAAAGGATTGGATTTTGAACTTATCCCATTTGGAGCAGGAAGGAGAGGTTGTCCTGGTGTGACTTTTGCTATTTCTATCAATGAATTGGTTTTAGCAAACCTTGTTCATCAATTTGATTGGAAATTGCCTGATGGAGTTGAAGGAAAGGATTTGGACATAATGTTGGTTCTGGAGCTTGCCGACGCGCAAAAAGCAACGGGGATTCGCAAATCTTCCAGACGTAGAGCACGCAAGGCGCAGACAACCGAGAAAGACAGGGTGTGGCGACTGGtggtggcgcgtcgcgcagGTACTCCTAAGCATGAAGATGTTTGGGTTGAAACTAGAATTCGATCcaaatttcttttgaagaatGTTATATATGTTCTTGTTGATATTCGTGACCCAACAGTTCATGATATTCGTCTCAACTCGATTTTAGTCAAAGACTTGGATATTGATGGTTATCACACTTACTTTGATGGTGGTTATGACATATACCAAAGCGTTCATTGGAGGTTGCAAAGGAGCGAAAATCTTATTTCGCTTTAA 1860 0.3785 MSIFLQSSLSHEIFTLFPMLFFTIFPLFLSLFFIIKWYFNNSVTTRNSPPSPPRFPLFGNLHQLGILPHRSLQNLSNKYGPLMLLYFGKVPVLVVSSADAASKVMKTHDLVLSDRPHCKIFDILLYGSKDVASCAYGEYWRQIRSLSVIHLLSNKRVRSYHHVREEETLRMMEFIKECCSSASPLNLTELCSKITNDIVCRVALGRRYREGKGNKFQEVLSEFWELLGTVCIGDYIPWLDWLGKVNGLYSRAEKCAKYLDEFLEEVIEEHISRRSDGDVSVDNEEQGDFVDVLLSVQKTNAIGFPIERTSIKALILDMFAAGTDTTYTVLEWALSELLRHQTVMHKLQDEVRTVVGNRTHVTEEDLVNMNYLKAVIKETLRLHIPVPLLVPRRTMEDIKLDGYDIAAGSWVIVNAWAIARDPSIWEKPLEFKPERFMNSSIDYKGLDFELIPFGAGRRGCPGVTFAISINELVLANLVHQFDWKLPDGVEGKDLDIMLVLELADAQKATGIRKSSRRRARKAQTTEKDRVWRLVVARRAGTPKHEDVWVETRIRSKFLLKNVIYVLVDIRDPTVHDIRLNSILVKDLDIDGYHTYFDGGYDIYQSVHWRLQRSENLISL 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01893 619 Gene3D Cytochrome P450 34 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Tsu02g01893 619 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PANTHER CYTOCHROME P450 FAMILY PROTEIN 22 503 - -
Tsu02g01893 619 SUPERFAMILY Cytochrome P450 49 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu02g01893 619 PANTHER CYTOCHROME P450 71B11-RELATED 22 503 - -
Tsu02g01893 619 Pfam Cytochrome P450 49 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01893 Tsu-Chr2 17681575 17715157 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01893 46 485 Cytochrome P450 AT3G48270 52.834 8.78e-171 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01893 - - gmx:100819183 700.664