Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01880 ATGGCTTATAGACGTTCCCTCTTGCAAAGAGGAAACAATCTCATAGATCGAAGATACCACCAATCTTTCACCTATATCCTCCACAACGATGAACCAAAACGCGACCAACAAGATGAAATAAAATCATCTTCAACAGAAATTAGTAACAGTTTTATTCAAAGAAGATCCTTTGGAAATTCTGTTAATGGATCAATAGGTTTTTTCTCATCTTCACAACATAGACAAAGTTTTTCTCCTTTTGCTGGATATAATTTGTGTAGAAATATGTCGACACTGGATCAGGCTGGTTCGGATAAGATTAGTATAATGACTGATGTTGCTGATGTTCTTGAGGATTCAACGTTGGATGCCGCTGTTTCTTCTCAGGGTCCTGTTGTTAGTGAAGTTGCTATTGCTGCTGCTGATTCTTATTTGCCTGTACAAGCTTTGCAGTATGTTATTGATGCTGTTCATACCTACACTGGGCTAGATTGGTGGGCAGCTATAATTCTAACAACTCTTTTGATTCGAAGCGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACACTAATGAGGCCTCGCTTGGAAGAGATAAAGGAAGAGATGGATGGGAAGACAATGGATCCCGAGGCTGTTGCTGAAGGtcagaagaagatgaataagCTATTCAAAGAATATGGCGTGAGTCCATTTACGCCATTGAAAGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTCGCGATAACAAACATGGCTGAAAAAATGCCATCATTCAAGCATGGTGGAGCTTTGTGGTTTACTGATCTCTCAACTCCAGATGCCTTGTACATTTTTCCAGTTTTAACTGCATTGTCATTCTTAGTAGTAGTAGAGtGTAATATGCAAGAAGGAATGGAAGGAAATCCTGTGGCTGGCACCATGAAAAATTTCTCAAGGGTTCTTGCTCTTCTTTCAGTTCCTTTCACCATGAGTTTTCCGAAGGCTATATTTTGTTACTGGGTTACATCAAATTTGTTTTCACTTTCGTATGGAATGGtgcTTAAAGTTCCTGGTGTTAAGAAAACTTTGGGCATTCCTGATTTACCTCCTCCAGAACCCAGCAGTTCTCCAAAAGCTCCATTCTCTATATTTGAAGCAATAAAAAAAGCTGCATCAGTGGCAAAGAGTCAAAGCTCAATGCCAGTAGAATCATCGaaacaatcaaataaaaagttaccttcttcttcttcttctgccGTTATTAGTCAAAGGCTTAGAAGCTTAGAGAAAAAAGTaaaaggaagaaagaaaagCAAGAAGTTGTGA 1311 0.3677 MAYRRSLLQRGNNLIDRRYHQSFTYILHNDEPKRDQQDEIKSSSTEISNSFIQRRSFGNSVNGSIGFFSSSQHRQSFSPFAGYNLCRNMSTLDQAGSDKISIMTDVADVLEDSTLDAAVSSQGPVVSEVAIAAADSYLPVQALQYVIDAVHTYTGLDWWAAIILTTLLIRSATVPLLINQLKATSKLTLMRPRLEEIKEEMDGKTMDPEAVAEGQKKMNKLFKEYGVSPFTPLKGLFIQGPVFISFFLAITNMAEKMPSFKHGGALWFTDLSTPDALYIFPVLTALSFLVVVECNMQEGMEGNPVAGTMKNFSRVLALLSVPFTMSFPKAIFCYWVTSNLFSLSYGMVLKVPGVKKTLGIPDLPPPEPSSSPKAPFSIFEAIKKAASVAKSQSSMPVESSKQSNKKLPSSSSSAVISQRLRSLEKKVKGRKKSKKL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01880 436 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 158 344 IPR028055 -
Tsu02g01880 436 PANTHER OXA1 79 411 IPR001708 GO:0016021|GO:0032977
Tsu02g01880 436 MobiDBLite consensus disorder prediction 390 419 - -
Tsu02g01880 436 MobiDBLite consensus disorder prediction 390 436 - -
Tsu02g01880 436 Pfam 60Kd inner membrane protein 158 344 IPR001708 GO:0016021|GO:0032977
Tsu02g01880 436 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 79 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01880 Tsu-Chr2 17570553 17577432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01880 51 356 Chloroplast and Mitochondria Gene Families AT2G28800 24.290 8.14e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01880 K03217 - gmx:100817052 557.755