Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g01858 ATGGACTTTGGTATGACACGTGTTATGATCTCTACATCTCAAGTTCACACACTGTCAACCTCAGTCACACACGATCAAACATATCTCCACTTCTCTGTAGCGAGCGCCGTCACGCCTTCTCCGTCTCAAACTCTCAAGCTCTCCGTCGTGATTCTCGTCTTCTCCGTCTCAAACTCTCAAGCTCTCAAACTCGCTGTATCACCTTCTCTGTATCAACTTCTCTGTATCGTCTTCTCCGTCATTTCCAGATCTTCAATCTCTTCTCATCCATTCATCATGTGTGATGTGATTTCTGGAACAACTTCAAGTGAAATTCGCTATCCTGGTATCCTTGAAGGATGGTTTGGTGTCCATTGGTGGACTGGTCGtacatttgttattgttttccCAACACTCGCTATATTTGCACCTTTGGTCAGCCTCAGCGAATTGGTGAGTGATAAGCACTGGAGTAGATCTCCACGAAAGAAAGTCTGGTTTAGATATTTTGCGGAATACCTGTACCCTGCCCATATCAATATCGATGCTCAACTGTGTCCATGCAACACTTCTATAACAAACTTACGCGCATTCTCTATGGTTGTTGCATATTCATTGAGATTCACATCTGCATTGTCAATTGCATTAGCAGTTGTTTTCCTTGTCATTGCTGCGGGGATCTCAATTATCAAGATTATTAGTGGAGGCATTGGGATGCCTAGACTCTTCCCCATAATTACTGATGTAGCCTCAGTTCTTGATCTATTCATTGTAGTTCCTGTGCTGATGACAACCTACATGTGTCACTACAATGGTAGGAAAATGTTTGAAGCATTTGCTTAA 822 0.4209 MDFGMTRVMISTSQVHTLSTSVTHDQTYLHFSVASAVTPSPSQTLKLSVVILVFSVSNSQALKLAVSPSLYQLLCIVFSVISRSSISSHPFIMCDVISGTTSSEIRYPGILEGWFGVHWWTGRTFVIVFPTLAIFAPLVSLSELVSDKHWSRSPRKKVWFRYFAEYLYPAHINIDAQLCPCNTSITNLRAFSMVVAYSLRFTSALSIALAVVFLVIAAGISIIKIISGGIGMPRLFPIITDVASVLDLFIVVPVLMTTYMCHYNGRKMFEAFA 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g01858 273 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 74 148 - -
Tsu02g01858 273 PANTHER AMINO ACID TRANSPORTER 74 148 - -
Tsu02g01858 273 PANTHER AMINO ACID TRANSPORTER 196 266 - -
Tsu02g01858 273 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 196 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g01858 Tsu-Chr2 17281974 17283312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g01858 92 264 Amino Acid or Auxin Permease AAAP Family AT5G38820 40.462 4.21e-32 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g01858 K14207 - gmx:100791286 136.346